RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 PPP1R9AQ9ULJ8 1098 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 IVNS1ABPQ9Y6Y0 642 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 PARP14Q460N5 1801 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 ZMYM6O95789 1325 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 RAD50Q92878 1312 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 VWA5AO00534 786 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 ZBED4O75132 1171 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 CYP21A2P08686 494 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 FGRP09769 529 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 CCL5P13501 91 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 MAPK4P31152 587 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 BMP2KLQ5H9B9 411 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 SNRNP48Q6IEG0 339 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 DPP9Q86TI2 863 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 MKL1Q969V6 931 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 RNF208Q9H0X6 261 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 ZSWIM5Q9P217 1185 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 PLXNB2O15031 1838 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 PLIN4Q96Q06 1357 aa10.62□□□□□ -0.71
GTF3C1-210ENST00000569394 E7EWF7 191 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 CDC45O75419 566 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 PGK2P07205 417 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 TOP1P11387 765 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 PTPREP23469 700 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 STAT3P40763 770 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 PRMT2P55345 433 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 UBXN2AP68543 259 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 TRDNQ13061 729 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 STOX1Q6ZVD7 989 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 IQCA1Q86XH1 822 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 SLAIN1Q8ND83 568 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 GMCL1P1Q8NEA9 526 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 NPLOC4Q8TAT6 608 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 TRIB2Q92519 343 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 ARMC5Q96C12 935 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 ZSCAN10Q96SZ4 725 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 UBAC1Q9BSL1 405 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 KRT23Q9C075 422 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 LSG1Q9H089 658 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 RIPK3Q9Y572 518 aa10.61□□□□□ -0.71
GTF3C1-210ENST00000569394 TNKSO95271 1327 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 DHX16O60231 1041 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 ZKSCAN1P17029 563 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 ADORA2AP29274 412 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 CNGA1P29973 690 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 RGS2P41220 211 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 STAT2P52630 851 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 RCSD1Q6JBY9 416 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 CASC1Q6TDU7 716 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 RALYLQ86SE5 291 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 RAB11FIP4Q86YS3 637 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 PRPF38AQ8NAV1 312 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 AGBL1Q96MI9 1066 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 DEFB118Q96PH6 123 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 MMP19Q99542 508 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 LRRC2Q9BYS8 371 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 UBA5Q9GZZ9 404 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 SENP2Q9HC62 589 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 VAT1LQ9HCJ6 419 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 FLRT1Q9NZU1 646 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 FEM1BQ9UK73 627 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 CENPFP49454 3210 aa10.6□□□□□ -0.71
GTF3C1-210ENST00000569394 A0A0G2JMZ2 1700 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 ZNFX1Q9P2E3 1918 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 IFIT3O14879 490 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 COBLO75128 1261 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 ALAS1P13196 640 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 CYP2C19P33261 490 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 COL9A3Q14050 684 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 PRAMEF19Q5SWL8 479 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 MORN1Q5T089 497 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 IFIT1BQ5T764 474 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 ANO1Q5XXA6 986 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 MB21D1Q8N884 522 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 ENAHQ8N8S7 591 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 NCOA7Q8NI08 942 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 CHURC1Q8WUH1 139 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 PIBF1Q8WXW3 757 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 MAP4K1Q92918 833 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 TCP11L1Q9NUJ3 509 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
GTF3C1-210ENST00000569394 SLC15A5A6NIM6 579 aa10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 STK25O00506 426 aa10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 PITPNM1O00562 1244 aa10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 SLC27A2O14975 620 aa10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 TFRCP02786 760 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 HMGCRP04035 888 aa10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 PDHBP11177 359 aa10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 PCP11498 1178 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 FCER1AP12319 257 aa10.58□□□□□ -0.72
GTF3C1-210ENST00000569394 CCND3P30281 292 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms