RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 PRRX2Q99811 253 aa13.86□□□□□ -0.19
CDH3-208ENST00000569036 SIL1Q9H173 461 aa13.86□□□□□ -0.19
CDH3-208ENST00000569036 DIS3Q9Y2L1 958 aaKnown RBP13.86□□□□□ -0.19
CDH3-208ENST00000569036 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
CDH3-208ENST00000569036 PTPRSQ13332 1948 aa13.86□□□□□ -0.19
CDH3-208ENST00000569036 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
CDH3-208ENST00000569036 ADCY6O43306 1168 aa13.85□□□□□ -0.19
CDH3-208ENST00000569036 PUS10Q3MIT2 529 aaKnown RBP13.85□□□□□ -0.19
CDH3-208ENST00000569036 SLC43A3Q8NBI5 491 aa13.85□□□□□ -0.19
CDH3-208ENST00000569036 TGFBRAP1Q8WUH2 860 aa13.85□□□□□ -0.19
CDH3-208ENST00000569036 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
CDH3-208ENST00000569036 UPF3AQ9H1J1 476 aaKnown RBP13.85□□□□□ -0.19
CDH3-208ENST00000569036 SAP30BPQ9UHR5 308 aaKnown RBP13.85□□□□□ -0.19
CDH3-208ENST00000569036 MYH1P12882 1939 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 CIAO1O76071 339 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 PFKMP08237 780 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 GNASQ5JWF2 1037 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 TATDN1Q6P1N9 297 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 TBC1D9Q6ZT07 1266 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 HERC6Q8IVU3 1022 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 PHOSPHO2Q8TCD6 241 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 AGBL1Q96MI9 1066 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
CDH3-208ENST00000569036 ALG13Q9NP73 1137 aaKnown RBP13.84□□□□□ -0.19
CDH3-208ENST00000569036 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDH3-208ENST00000569036 RAI14Q9P0K7 980 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
CDH3-208ENST00000569036 BAHCC1Q9P281 2608 aa13.84□□□□□ -0.19
CDH3-208ENST00000569036 MCM3APO60318 1980 aa13.83□□□□□ -0.19
CDH3-208ENST00000569036 SNAI1O95863 264 aaPredicted RBP13.83□□□□□ -0.2
CDH3-208ENST00000569036 HLA-DOAP06340 250 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 GJA9P57773 515 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 PI16Q6UXB8 463 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 ATF7IPQ6VMQ6 1270 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 BMP8AQ7Z5Y6 402 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 NEK9Q8TD19 979 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 ATG4CQ96DT6 458 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.2
CDH3-208ENST00000569036 TRPV6Q9H1D0 765 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 SPC25Q9HBM1 224 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 PRKAG3Q9UGI9 489 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 IL16Q14005 1332 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 SIP14410 1827 aa13.83□□□□□ -0.2
CDH3-208ENST00000569036 DMXL1Q9Y485 3027 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 KIF28PB7ZC32 967 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
CDH3-208ENST00000569036 CTAGE5O15320 804 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 B4GALT4O60513 344 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 SLC25A27O95847 323 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 DSG3P32926 999 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 IRS1P35568 1242 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 KCTD2Q14681 263 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 HERC4Q5GLZ8 1057 aaPredicted RBP13.82□□□□□ -0.2
CDH3-208ENST00000569036 DEFB128Q7Z7B8 93 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 ADHFE1Q8IWW8 467 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 UPF3BQ9BZI7 483 aaKnown RBP13.82□□□□□ -0.2
CDH3-208ENST00000569036 HMG20BQ9P0W2 317 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 MUTYHQ9UIF7 546 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 GVINP1Q7Z2Y8 2422 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 COL4A6Q14031 1691 aa13.82□□□□□ -0.2
CDH3-208ENST00000569036 WDR87Q6ZQQ6 2873 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 LCHNA4D1U4 455 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 PLCG2P16885 1265 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 GUCY1A2P33402 732 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 ID4P47928 161 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 TIMM10P62072 90 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
CDH3-208ENST00000569036 TMEM132BQ14DG7 1078 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
CDH3-208ENST00000569036 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
CDH3-208ENST00000569036 TANC1Q9C0D5 1861 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 A0A1W2PRG0 241 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 BAG3O95817 575 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 ACTN1P12814 892 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 ITGA7Q13683 1181 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 CCDC27Q2M243 656 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 CERKLQ49MI3 558 aaPredicted RBP13.8□□□□□ -0.2
CDH3-208ENST00000569036 CXCL17Q6UXB2 119 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 ASCL5Q7RTU5 278 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 SPATA5Q8NB90 893 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 PBXIP1Q96AQ6 731 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 SUGCTQ9HAC7 445 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 DNAH14Q0VDD8 3507 aa13.8□□□□□ -0.2
CDH3-208ENST00000569036 TET1Q8NFU7 2136 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 TPRP12270 2363 aaKnown RBP13.79□□□□□ -0.2
CDH3-208ENST00000569036 NCOR2Q9Y618 2525 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 TMEM221A6NGB7 291 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 M0R296 226 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 FLOT1O75955 427 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
CDH3-208ENST00000569036 PPP4CP60510 307 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 BEX3Q00994 111 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 PKN1Q16512 942 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 KIAA1755Q5JYT7 1200 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 MAMDC4Q6UXC1 1216 aa13.79□□□□□ -0.2
CDH3-208ENST00000569036 RIOX2Q8IUF8 465 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms