RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SLC38A10Q9HBR0 1119 aa22.47■■□□□ 1.19
SPSB3-210ENST00000568416 SOX1O00570 391 aaPredicted RBP22.46■■□□□ 1.19
SPSB3-210ENST00000568416 BMP3P12645 472 aa22.46■■□□□ 1.19
SPSB3-210ENST00000568416 CTDSPL2Q05D32 466 aa22.46■■□□□ 1.19
SPSB3-210ENST00000568416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.46■■□□□ 1.19
SPSB3-210ENST00000568416 TICAM2Q86XR7 235 aa22.46■■□□□ 1.19
SPSB3-210ENST00000568416 SMC5Q8IY18 1101 aa22.46■■□□□ 1.19
SPSB3-210ENST00000568416 ANAPC4Q9UJX5 808 aa22.46■■□□□ 1.19
SPSB3-210ENST00000568416 TACC3Q9Y6A5 838 aa22.46■■□□□ 1.19
SPSB3-210ENST00000568416 KBTBD13C9JR72 458 aa22.45■■□□□ 1.18
SPSB3-210ENST00000568416 ATN1P54259 1190 aaPredicted RBP22.45■■□□□ 1.18
SPSB3-210ENST00000568416 ALX1Q15699 326 aa22.45■■□□□ 1.18
SPSB3-210ENST00000568416 CPXCR1Q8N123 301 aa22.45■■□□□ 1.18
SPSB3-210ENST00000568416 LNPKQ9C0E8 428 aa22.45■■□□□ 1.18
SPSB3-210ENST00000568416 RAVER2Q9HCJ3 691 aaKnown RBP22.45■■□□□ 1.18
SPSB3-210ENST00000568416 INCENPQ9NQS7 918 aa22.45■■□□□ 1.18
SPSB3-210ENST00000568416 DNAJC25-GNG10A0A024R161 153 aa22.44■■□□□ 1.18
SPSB3-210ENST00000568416 ZNF865P0CJ78 1059 aaPredicted RBP22.44■■□□□ 1.18
SPSB3-210ENST00000568416 TAL1P17542 331 aaPredicted RBP22.44■■□□□ 1.18
SPSB3-210ENST00000568416 OAZ1P54368 228 aa22.44■■□□□ 1.18
SPSB3-210ENST00000568416 LRRC41Q15345 812 aa22.44■■□□□ 1.18
SPSB3-210ENST00000568416 PPP4R3BQ5MIZ7 849 aa22.44■■□□□ 1.18
SPSB3-210ENST00000568416 MSL3Q8N5Y2 521 aaKnown RBP22.44■■□□□ 1.18
SPSB3-210ENST00000568416 GMCL1Q96IK5 515 aa22.44■■□□□ 1.18
SPSB3-210ENST00000568416 FAM227BQ96M60 508 aa22.44■■□□□ 1.18
SPSB3-210ENST00000568416 IL17RBQ9NRM6 502 aa22.44■■□□□ 1.18
SPSB3-210ENST00000568416 CTDP1Q9Y5B0 961 aaPredicted RBP22.44■■□□□ 1.18
SPSB3-210ENST00000568416 CEP290O15078 2479 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 A0A0D9SFI3 127 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 TSPY2A6NKD2 308 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 FGRP09769 529 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 RTP1P59025 263 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 MCMDC2Q4G0Z9 681 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 SLC39A5Q6ZMH5 540 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 DDX11Q96FC9 970 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 LRCH3Q96II8 777 aa22.43■■□□□ 1.18
SPSB3-210ENST00000568416 UBE2OQ9C0C9 1292 aaKnown RBP22.43■■□□□ 1.18
SPSB3-210ENST00000568416 MYH4Q9Y623 1939 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 TMEM232C9JQI7 657 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 ORC4O43929 436 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 FDX1P10109 184 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 NOVP48745 357 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 SLC4A3P48751 1232 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 MAMDC4Q6UXC1 1216 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 FAM160B2Q86V87 743 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 TDHQ8IZJ6 230 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 CHST13Q8NET6 341 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 RWDD1Q9H446 243 aaPredicted RBP22.42■■□□□ 1.18
SPSB3-210ENST00000568416 XPNPEP3Q9NQH7 507 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 STX8Q9UNK0 236 aa22.42■■□□□ 1.18
SPSB3-210ENST00000568416 TRIOBPQ9H2D6 2365 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 SYNGAP1Q96PV0 1343 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 NMT2O60551 498 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 RARBP10826 455 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 AKR1A1P14550 325 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 ADCYAP1R1P41586 468 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 SLC1A4P43007 532 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 STAT2P52630 851 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 SNX17Q15036 470 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 ZNF467Q7Z7K2 595 aaPredicted RBP22.41■■□□□ 1.18
SPSB3-210ENST00000568416 STAG1Q8WVM7 1258 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 FBXO40Q9UH90 709 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 CNPY2Q9Y2B0 182 aa22.41■■□□□ 1.18
SPSB3-210ENST00000568416 PLA2G6O60733 806 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 SNAI1O95863 264 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-210ENST00000568416 IGHDP01880 384 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 FGAP02671 866 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 MYCNP04198 464 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-210ENST00000568416 MCCP23508 829 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 MDM2Q00987 491 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-210ENST00000568416 NMIQ13287 307 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-210ENST00000568416 LRIT3Q3SXY7 679 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 B4GALNT3Q6L9W6 998 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 CHURC1Q8WUH1 139 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 FGD4Q96M96 766 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 ATP11BQ9Y2G3 1177 aa22.4■■□□□ 1.18
SPSB3-210ENST00000568416 ZNF536O15090 1300 aa22.39■■□□□ 1.18
SPSB3-210ENST00000568416 ZMYM6O95789 1325 aa22.39■■□□□ 1.18
SPSB3-210ENST00000568416 RANBP6O60518 1105 aaKnown RBP22.39■■□□□ 1.17
SPSB3-210ENST00000568416 HSPD1P10809 573 aaKnown RBP22.39■■□□□ 1.17
SPSB3-210ENST00000568416 C1orf53Q5VUE5 145 aa22.39■■□□□ 1.17
SPSB3-210ENST00000568416 RCSD1Q6JBY9 416 aa22.39■■□□□ 1.17
SPSB3-210ENST00000568416 ZNF589Q86UQ0 364 aaPredicted RBP22.39■■□□□ 1.17
SPSB3-210ENST00000568416 CHD1LQ86WJ1 897 aa22.39■■□□□ 1.17
SPSB3-210ENST00000568416 ANKRD35Q8N283 1001 aa22.39■■□□□ 1.17
SPSB3-210ENST00000568416 PHF24Q9UPV7 400 aa22.39■■□□□ 1.17
SPSB3-210ENST00000568416 ZNFX1Q9P2E3 1918 aaKnown RBP22.39■■□□□ 1.17
SPSB3-210ENST00000568416 TRIM6-TRIM34B2RNG4 842 aa22.38■■□□□ 1.17
SPSB3-210ENST00000568416 PGK1P00558 417 aa22.38■■□□□ 1.17
SPSB3-210ENST00000568416 RNF180Q86T96 592 aa22.38■■□□□ 1.17
SPSB3-210ENST00000568416 EXOC6Q8TAG9 804 aa22.38■■□□□ 1.17
SPSB3-210ENST00000568416 FERMT2Q96AC1 680 aa22.38■■□□□ 1.17
SPSB3-210ENST00000568416 OSBPL3Q9H4L5 887 aa22.38■■□□□ 1.17
SPSB3-210ENST00000568416 ISY1Q9ULR0 285 aaKnown RBP22.38■■□□□ 1.17
SPSB3-210ENST00000568416 PLXNA1Q9UIW2 1896 aa22.38■■□□□ 1.17
SPSB3-210ENST00000568416 CCDC171Q6TFL3 1326 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 ADAMTS4O75173 837 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 NUCB1Q02818 461 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 IKQ13123 557 aaPredicted RBP22.37■■□□□ 1.17
SPSB3-210ENST00000568416 TRIM60Q495X7 471 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms