RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 FGRP09769 529 aa16.92■□□□□ 0.3
COMMD4-216ENST00000567023 NOVP48745 357 aa16.92■□□□□ 0.3
COMMD4-216ENST00000567023 OAZ1P54368 228 aa16.92■□□□□ 0.3
COMMD4-216ENST00000567023 PRAMEF19Q5SWL8 479 aa16.92■□□□□ 0.3
COMMD4-216ENST00000567023 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
COMMD4-216ENST00000567023 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
COMMD4-216ENST00000567023 TINF2Q9BSI4 451 aa16.92■□□□□ 0.3
COMMD4-216ENST00000567023 SENP6Q9GZR1 1112 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-216ENST00000567023 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-216ENST00000567023 ZMYND8Q9ULU4 1186 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-216ENST00000567023 RIPK3Q9Y572 518 aa16.92■□□□□ 0.3
COMMD4-216ENST00000567023 DNAJC25-GNG10A0A024R161 153 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 ZBED4O75132 1171 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 FDX1P10109 184 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 BMP3P12645 472 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 MCMDC2Q4G0Z9 681 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 SLFN13Q68D06 897 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 SNRNP48Q6IEG0 339 aaKnown RBP16.91■□□□□ 0.3
COMMD4-216ENST00000567023 LRRC47Q8N1G4 583 aaKnown RBP16.91■□□□□ 0.3
COMMD4-216ENST00000567023 GMCL1Q96IK5 515 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 IL17RBQ9NRM6 502 aa16.91■□□□□ 0.3
COMMD4-216ENST00000567023 LAMA2P24043 3122 aaKnown RBP16.9■□□□□ 0.3
COMMD4-216ENST00000567023 PLA2G6O60733 806 aa16.9■□□□□ 0.3
COMMD4-216ENST00000567023 SYN1P17600 705 aa16.9■□□□□ 0.3
COMMD4-216ENST00000567023 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
COMMD4-216ENST00000567023 FAM227BQ96M60 508 aa16.9■□□□□ 0.3
COMMD4-216ENST00000567023 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
COMMD4-216ENST00000567023 PLXNA1Q9UIW2 1896 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 ORC4O43929 436 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 IGHDP01880 384 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 FGAP02671 866 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 MAGEA10P43363 369 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-216ENST00000567023 STAT2P52630 851 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 NUCB1Q02818 461 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 CTDSPL2Q05D32 466 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 GJC2Q5T442 439 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-216ENST00000567023 MAMDC4Q6UXC1 1216 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-216ENST00000567023 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 CHURC1Q8WUH1 139 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 INCENPQ9NQS7 918 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 TACC3Q9Y6A5 838 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 ZMYM6O95789 1325 aa16.89■□□□□ 0.29
COMMD4-216ENST00000567023 SMCHD1A6NHR9 2005 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 KBTBD13C9JR72 458 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 ZNF865P0CJ78 1059 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-216ENST00000567023 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
COMMD4-216ENST00000567023 SLC1A4P43007 532 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 ANO1Q5XXA6 986 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 FAM160B2Q86V87 743 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 RAVER2Q9HCJ3 691 aaKnown RBP16.88■□□□□ 0.29
COMMD4-216ENST00000567023 FBXO40Q9UH90 709 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 CTDP1Q9Y5B0 961 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-216ENST00000567023 SYNGAP1Q96PV0 1343 aa16.88■□□□□ 0.29
COMMD4-216ENST00000567023 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 RARBP10826 455 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 SNX17Q15036 470 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 LRRC41Q15345 812 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 C1orf53Q5VUE5 145 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 SLC39A5Q6ZMH5 540 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 PLEKHM2Q8IWE5 1019 aa16.87■□□□□ 0.29
COMMD4-216ENST00000567023 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 RANBP6O60518 1105 aaKnown RBP16.86■□□□□ 0.29
COMMD4-216ENST00000567023 NMT2O60551 498 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 SNAI1O95863 264 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-216ENST00000567023 PCP11498 1178 aaKnown RBP16.86■□□□□ 0.29
COMMD4-216ENST00000567023 AKR1A1P14550 325 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 TAL1P17542 331 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-216ENST00000567023 MCCP23508 829 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 ATN1P54259 1190 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-216ENST00000567023 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-216ENST00000567023 LRIT3Q3SXY7 679 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 RCSD1Q6JBY9 416 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-216ENST00000567023 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 CNPY2Q9Y2B0 182 aa16.86■□□□□ 0.29
COMMD4-216ENST00000567023 COL6A3P12111 3177 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 SDSP20132 328 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 GPR153Q6NV75 609 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 RNF180Q86T96 592 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 TDHQ8IZJ6 230 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 ANKRD35Q8N283 1001 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 RILPL2Q969X0 211 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 ZNF536O15090 1300 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
COMMD4-216ENST00000567023 SOX1O00570 391 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-216ENST00000567023 ADCYAP1R1P41586 468 aa16.84■□□□□ 0.29
COMMD4-216ENST00000567023 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
COMMD4-216ENST00000567023 RTP1P59025 263 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms