RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 NUCB1Q02818 461 aa12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 MAP2K5Q13163 448 aa12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 PLEKHM2Q8IWE5 1019 aa12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 CEP95Q96GE4 821 aa12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 MOV10L1Q9BXT6 1211 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 SPATC1LQ9H0A9 340 aa12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 HMX1Q9NP08 348 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 INCENPQ9NQS7 918 aa12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 HOXC10Q9NYD6 342 aa12.01□□□□□ -0.49
GTF3C1-206ENST00000566779 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 RANBP6O60518 1105 aaKnown RBP12□□□□□ -0.49
GTF3C1-206ENST00000566779 NDUFB10O96000 172 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
GTF3C1-206ENST00000566779 MCMDC2Q4G0Z9 681 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 MORN1Q5T089 497 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 LBX2Q6XYB7 198 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 DPP9Q86TI2 863 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 ZNF589Q86UQ0 364 aaPredicted RBP12□□□□□ -0.49
GTF3C1-206ENST00000566779 DIS3LQ8TF46 1054 aaKnown RBP12□□□□□ -0.49
GTF3C1-206ENST00000566779 HELLSQ9NRZ9 838 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 CCDC171Q6TFL3 1326 aa12□□□□□ -0.49
GTF3C1-206ENST00000566779 NMT2O60551 498 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 TTLL1O95922 423 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 PTPREP23469 700 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 ADORA2AP29274 412 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 CCND3P30281 292 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 DSG2Q14126 1118 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 MFSD14CQ5VZR4 134 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 CWC27Q6UX04 472 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 CPXCR1Q8N123 301 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 MB21D1Q8N884 522 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 KIFC2Q96AC6 838 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 PAK6Q9NQU5 681 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 FLRT1Q9NZU1 646 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 NYAP2Q9P242 653 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 STX8Q9UNK0 236 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 RPTORQ8N122 1335 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 SMCHD1A6NHR9 2005 aa11.99□□□□□ -0.49
GTF3C1-206ENST00000566779 PLIN4Q96Q06 1357 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 F5H6K3 240 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 FOXP2O15409 715 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 SDSP20132 328 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 CYP2C19P33261 490 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 KLRC3Q07444 240 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 GRB14Q14449 540 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 TMEM132BQ14DG7 1078 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 CCDC96Q2M329 555 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 SLFN13Q68D06 897 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 TRMT44Q8IYL2 757 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 PDCD7Q8N8D1 485 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 NPLOC4Q8TAT6 608 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 HTATIP2Q9BUP3 242 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 PPP1R9AQ9ULJ8 1098 aa11.98□□□□□ -0.49
GTF3C1-206ENST00000566779 H0YGN5 161 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 VWA5AO00534 786 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 PGK2P07205 417 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 HSPD1P10809 573 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 XRCC5P13010 732 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 SNRNP48Q6IEG0 339 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 RASGRP2Q7LDG7 609 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 NEDD1Q8NHV4 660 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 USP6NLQ92738 828 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 PAWRQ96IZ0 340 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 MMP19Q99542 508 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 HOMER2Q9NSB8 354 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 MTMR4Q9NYA4 1195 aa11.97□□□□□ -0.49
GTF3C1-206ENST00000566779 IGKV6D-41A0A0C4DH26 115 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 DPYSL4O14531 572 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 FCER1AP12319 257 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 BMP3P12645 472 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 STAT3P40763 770 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 CLCN6P51797 869 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 MFAP1P55081 439 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 KCTD2Q14681 263 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 ANO1Q5XXA6 986 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 C7orf61Q8IZ16 206 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 SHCBP1Q8NEM2 672 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 MROH8Q9H579 483 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 RAVER2Q9HCJ3 691 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 SLC5A4Q9NY91 659 aa11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.96□□□□□ -0.49
GTF3C1-206ENST00000566779 BRCA2P51587 3418 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 TMEM232C9JQI7 657 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 EVI5O60447 810 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 COBLO75128 1261 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 ZBED4O75132 1171 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 SLC25A27O95847 323 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 FGAP02671 866 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 MCCP23508 829 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 SLC1A4P43007 532 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 SNAP25P60880 206 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 CCDC174Q6PII3 467 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 NECAB2Q7Z6G3 386 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 TBC1D10CQ8IV04 446 aa11.95□□□□□ -0.5
GTF3C1-206ENST00000566779 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms