RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RNF180Q86T96 592 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 GMCL1P1Q8NEA9 526 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 REPS2Q8NFH8 660 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 STAG1Q8WVM7 1258 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 VTI1AQ96AJ9 217 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 FAM227BQ96M60 508 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 PRO3102Q9H379 93 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 PRDM5Q9NQX1 630 aaPredicted RBP7.6□□□□□ -1.19
TCF4-228ENST00000565393 FBXO40Q9UH90 709 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 ZNF214Q9UL59 606 aaPredicted RBP7.6□□□□□ -1.19
TCF4-228ENST00000565393 FAM184BQ9ULE4 1060 aa7.6□□□□□ -1.19
TCF4-228ENST00000565393 SIPA1L1O43166 1804 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 ATP2A1O14983 1001 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 NMT2O60551 498 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 PGK1P00558 417 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 IGHA2P01877 340 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 FGAP02671 866 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 FDX1P10109 184 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 TAL1P17542 331 aaPredicted RBP7.59□□□□□ -1.19
TCF4-228ENST00000565393 STAT2P52630 851 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 RTP1P59025 263 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 SNAP25P60880 206 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
TCF4-228ENST00000565393 LRRC41Q15345 812 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 CCDC174Q6PII3 467 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 KCTD1Q719H9 257 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 FAM160B2Q86V87 743 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 CHD1LQ86WJ1 897 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 CHST13Q8NET6 341 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 EXOC6Q8TAG9 804 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 LRCH3Q96II8 777 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 AGBL1Q96MI9 1066 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 SLC38A10Q9HBR0 1119 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 IL17RBQ9NRM6 502 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 HOMER2Q9NSB8 354 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 NRBP1Q9UHY1 535 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 ZHX1Q9UKY1 873 aaPredicted RBP7.59□□□□□ -1.19
TCF4-228ENST00000565393 SYNPO2Q9UMS6 1093 aa7.59□□□□□ -1.19
TCF4-228ENST00000565393 ROBO3Q96MS0 1386 aa7.59□□□□□ -1.2
TCF4-228ENST00000565393 POTEB2H3BUK9 544 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 SOX1O00570 391 aaPredicted RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 SNAI1O95863 264 aaPredicted RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 HSPD1P10809 573 aaKnown RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 ALAS1P13196 640 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 AKR1A1P14550 325 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 SDSP20132 328 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 OAZ1P54368 228 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 MFAP1P55081 439 aaKnown RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 ACVR2BQ13705 512 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 ALX1Q15699 326 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 CCDC96Q2M329 555 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 NOL8Q76FK4 1167 aaKnown RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 TDHQ8IZJ6 230 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 MSL3Q8N5Y2 521 aaKnown RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 GMCL1Q96IK5 515 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 GPCPD1Q9NPB8 672 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 ANAPC4Q9UJX5 808 aa7.58□□□□□ -1.2
TCF4-228ENST00000565393 SUPT16HQ9Y5B9 1047 aaKnown RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 RBBP6Q7Z6E9 1792 aaKnown RBP7.58□□□□□ -1.2
TCF4-228ENST00000565393 SALL3Q9BXA9 1300 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 MYH1P12882 1939 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 DNAJC25-GNG10A0A024R161 153 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 A0A0D9SFI3 127 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 ZNF213O14771 459 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 ZNF865P0CJ78 1059 aaPredicted RBP7.57□□□□□ -1.2
TCF4-228ENST00000565393 TOP1P11387 765 aaKnown RBP7.57□□□□□ -1.2
TCF4-228ENST00000565393 SLC16A2P36021 539 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 HAND2P61296 217 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 CNTN2Q02246 1040 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 NUCB1Q02818 461 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 KCNA10Q16322 511 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 TRIM60Q495X7 471 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 CWC27Q6UX04 472 aaKnown RBP7.57□□□□□ -1.2
TCF4-228ENST00000565393 MAMDC4Q6UXC1 1216 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 MFSD6Q6ZSS7 791 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 TICAM2Q86XR7 235 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 PLEKHM2Q8IWE5 1019 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 SMC5Q8IY18 1101 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 BADQ92934 168 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 ACAD9Q9H845 621 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 SPC25Q9HBM1 224 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 DIAPH3Q9NSV4 1193 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.57□□□□□ -1.2
TCF4-228ENST00000565393 PRR12Q9ULL5 1215 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.57□□□□□ -1.2
TCF4-228ENST00000565393 TACC3Q9Y6A5 838 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 MYO5AQ9Y4I1 1855 aaKnown RBP7.57□□□□□ -1.2
TCF4-228ENST00000565393 ATAD5Q96QE3 1844 aa7.57□□□□□ -1.2
TCF4-228ENST00000565393 FRMPD2Q68DX3 1309 aaPredicted RBP7.56□□□□□ -1.2
TCF4-228ENST00000565393 SYNGAP1Q96PV0 1343 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 MGAMO43451 1857 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 DCDC2CA8MYV0 355 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 FOXP2O15409 715 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 ORC4O43929 436 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 PLA2G6O60733 806 aa7.56□□□□□ -1.2
TCF4-228ENST00000565393 C6orf222P0C671 652 aaPredicted RBP7.56□□□□□ -1.2
TCF4-228ENST00000565393 RAG1P15918 1043 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms