RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CCDC122Q5T0U0 273 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 CSRNP2Q9H175 543 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 GPR108Q9NPR9 543 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 CTNND2Q9UQB3 1225 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 PLCH1Q4KWH8 1693 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 SMIM22K7EJ46 135 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 KRT14P02533 472 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 KRT31Q15323 416 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 NT5DC1Q5TFE4 455 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 NCOA7Q8NI08 942 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 EEF2KMTQ96G04 330 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 LACRTQ9GZZ8 138 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 PIH1D3Q9NQM4 214 aaKnown RBP18.25■□□□□ 0.51
LINC00554-201ENST00000564841 DACH1Q9UI36 760 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 ERFEQ4G0M1 354 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 BARGINQ6ZT62 677 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 C3orf67Q6ZVT6 689 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 CEP57Q86XR8 500 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 LRRC1Q9BTT6 524 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 NDUFA10O95299 355 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 PDE6BP35913 854 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 CUL4BQ13620 913 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 CYP26C1Q6V0L0 522 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 SMCR8Q8TEV9 937 aaPredicted RBP18.24■□□□□ 0.51
LINC00554-201ENST00000564841 SH3GL2Q99962 352 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 PLA2G12BQ9BX93 195 aa18.24■□□□□ 0.51
LINC00554-201ENST00000564841 FAM205CA6NFA0 338 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 PES1O00541 588 aaKnown RBP18.23■□□□□ 0.51
LINC00554-201ENST00000564841 TUBBP07437 444 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 ELF1P32519 619 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 HERVK_113P62684 666 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 TUBB4BP68371 445 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 SETQ01105 290 aaPredicted RBP18.23■□□□□ 0.51
LINC00554-201ENST00000564841 BLZF1Q9H2G9 400 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 JADE2Q9NQC1 790 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 MACROD2A1Z1Q3 448 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 KIF1CO43896 1103 aaKnown RBP18.23■□□□□ 0.51
LINC00554-201ENST00000564841 KIAA0754O94854 1291 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 PDHBP11177 359 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 BCAMP50895 628 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 FILIP1LQ4L180 1135 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 CDKAL1Q5VV42 579 aa18.23■□□□□ 0.51
LINC00554-201ENST00000564841 MEFVO15553 781 aaPredicted RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 PRKAB2O43741 272 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 SKAP2O75563 359 aaPredicted RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 IARSP41252 1262 aaKnown RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 AMIGO3Q86WK7 504 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 OXER1Q8TDS5 423 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 MIEF2Q96C03 454 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 PTPREP23469 700 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 ERCC5P28715 1186 aaPredicted RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 CXCR5P32302 372 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 CYP27A1Q02318 531 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 TRIM29Q14134 588 aa18.22■□□□□ 0.51
LINC00554-201ENST00000564841 AENQ8WTP8 325 aaKnown RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 CCNL1Q9UK58 526 aaPredicted RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.22■□□□□ 0.51
LINC00554-201ENST00000564841 PPP1R3GB7ZBB8 358 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 NEBLO76041 1014 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 RDXP35241 583 aaKnown RBP18.21■□□□□ 0.51
LINC00554-201ENST00000564841 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
LINC00554-201ENST00000564841 IFT88Q13099 833 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 E2F5Q15329 346 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 SPRED3Q2MJR0 410 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 NOSTRINQ8IVI9 506 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
LINC00554-201ENST00000564841 MCM8Q9UJA3 840 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 TTC26A0AVF1 554 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 HSPA1LP34931 641 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 VPS72Q15906 364 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 APOA5Q6Q788 366 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 APPBP2Q92624 585 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 RNPC3Q96LT9 517 aaKnown RBP18.21■□□□□ 0.51
LINC00554-201ENST00000564841 JAG2Q9Y219 1238 aa18.21■□□□□ 0.51
LINC00554-201ENST00000564841 PSMD14O00487 310 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 BACH1O14867 736 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 CCDC152Q4G0S7 254 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 TBC1D9BQ66K14 1250 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 KLC4Q9NSK0 619 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 FAM217BQ9NTX9 383 aaPredicted RBP18.2■□□□□ 0.5
LINC00554-201ENST00000564841 ODF2LQ9ULJ1 636 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 RIC1Q4ADV7 1423 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 NUP98P52948 1817 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 NTRK3Q16288 839 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 MIGA1Q8NAN2 632 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 VPS54Q9P1Q0 977 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 ABCF2Q9UG63 623 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
LINC00554-201ENST00000564841 SF3B2Q13435 895 aaKnown RBP18.2■□□□□ 0.5
LINC00554-201ENST00000564841 NEDD9Q14511 834 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 NAIF1Q69YI7 327 aaPredicted RBP18.2■□□□□ 0.5
LINC00554-201ENST00000564841 ARMT1Q9H993 441 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 MYO1AQ9UBC5 1043 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 ANGEL1Q9UNK9 670 aaKnown RBP18.2■□□□□ 0.5
LINC00554-201ENST00000564841 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
LINC00554-201ENST00000564841 SLIT2O94813 1529 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms