RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 DIS3Q9Y2L1 958 aaKnown RBP22.49■■□□□ 1.19
NME3-207ENST00000564628 LAMA2P24043 3122 aaKnown RBP22.48■■□□□ 1.19
NME3-207ENST00000564628 ADCYAP1R1P41586 468 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 TDO2P48775 406 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 SHHQ15465 462 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 FAM47AQ5JRC9 791 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 ZNF589Q86UQ0 364 aaPredicted RBP22.48■■□□□ 1.19
NME3-207ENST00000564628 RIOX2Q8IUF8 465 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 NACAP1Q9BZK3 213 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 PRDM5Q9NQX1 630 aaPredicted RBP22.48■■□□□ 1.19
NME3-207ENST00000564628 PDLIM7Q9NR12 457 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 PHF24Q9UPV7 400 aa22.48■■□□□ 1.19
NME3-207ENST00000564628 HIP1O00291 1037 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 MYCNP04198 464 aaPredicted RBP22.47■■□□□ 1.19
NME3-207ENST00000564628 APPP05067 770 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 EEF2P13639 858 aaKnown RBP22.47■■□□□ 1.19
NME3-207ENST00000564628 COPB2P35606 906 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 VPS53Q5VIR6 699 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.47■■□□□ 1.19
NME3-207ENST00000564628 BADQ92934 168 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 MMP19Q99542 508 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 CCDC171Q6TFL3 1326 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 LAMA4Q16363 1823 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 UNC80Q8N2C7 3258 aa22.47■■□□□ 1.19
NME3-207ENST00000564628 VWA5AO00534 786 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 RARBP10826 455 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 KCTD2Q14681 263 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 ALX1Q15699 326 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 TINF2Q9BSI4 451 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 GOPCQ9HD26 462 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 XPNPEP3Q9NQH7 507 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 PPP1R9AQ9ULJ8 1098 aa22.46■■□□□ 1.19
NME3-207ENST00000564628 COL11A1P12107 1806 aaPredicted RBP22.45■■□□□ 1.19
NME3-207ENST00000564628 ZNFX1Q9P2E3 1918 aaKnown RBP22.45■■□□□ 1.18
NME3-207ENST00000564628 MINDY4BA8MYZ0 360 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 STAT3P40763 770 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 ZNF792Q3KQV3 632 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 C9orf50Q5SZB4 431 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 SAMD1Q6SPF0 538 aaPredicted RBP22.45■■□□□ 1.18
NME3-207ENST00000564628 FERMT2Q96AC1 680 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 CCDC136Q96JN2 1154 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 FAM161BQ96MY7 647 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 NAPBQ9H115 298 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 FBXO28Q9NVF7 368 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 ZNF214Q9UL59 606 aaPredicted RBP22.45■■□□□ 1.18
NME3-207ENST00000564628 ZMYM6O95789 1325 aa22.45■■□□□ 1.18
NME3-207ENST00000564628 TRIM43BA6NCK2 446 aa22.44■■□□□ 1.18
NME3-207ENST00000564628 SMAD3P84022 425 aaKnown RBP22.44■■□□□ 1.18
NME3-207ENST00000564628 SH3RF1Q7Z6J0 888 aa22.44■■□□□ 1.18
NME3-207ENST00000564628 RNF180Q86T96 592 aa22.44■■□□□ 1.18
NME3-207ENST00000564628 REPS2Q8NFH8 660 aa22.44■■□□□ 1.18
NME3-207ENST00000564628 TRIM43Q96BQ3 446 aaPredicted RBP22.44■■□□□ 1.18
NME3-207ENST00000564628 DIAPH3Q9NSV4 1193 aa22.44■■□□□ 1.18
NME3-207ENST00000564628 TACC3Q9Y6A5 838 aa22.44■■□□□ 1.18
NME3-207ENST00000564628 PGK2P07205 417 aa22.43■■□□□ 1.18
NME3-207ENST00000564628 HSPD1P10809 573 aaKnown RBP22.43■■□□□ 1.18
NME3-207ENST00000564628 RASA1P20936 1047 aa22.43■■□□□ 1.18
NME3-207ENST00000564628 TLE2Q04725 743 aa22.43■■□□□ 1.18
NME3-207ENST00000564628 PPARAQ07869 468 aa22.43■■□□□ 1.18
NME3-207ENST00000564628 COL25A1Q9BXS0 654 aaPredicted RBP22.43■■□□□ 1.18
NME3-207ENST00000564628 AKR1A1P14550 325 aa22.42■■□□□ 1.18
NME3-207ENST00000564628 CWC27Q6UX04 472 aaKnown RBP22.42■■□□□ 1.18
NME3-207ENST00000564628 MSL3Q8N5Y2 521 aaKnown RBP22.42■■□□□ 1.18
NME3-207ENST00000564628 CDX2Q99626 313 aaPredicted RBP22.42■■□□□ 1.18
NME3-207ENST00000564628 SEMA6BQ9H3T3 888 aa22.42■■□□□ 1.18
NME3-207ENST00000564628 ANAPC4Q9UJX5 808 aa22.42■■□□□ 1.18
NME3-207ENST00000564628 PLXNA1Q9UIW2 1896 aa22.42■■□□□ 1.18
NME3-207ENST00000564628 CLTBP09497 229 aa22.41■■□□□ 1.18
NME3-207ENST00000564628 ZNF865P0CJ78 1059 aaPredicted RBP22.41■■□□□ 1.18
NME3-207ENST00000564628 MFAP1P55081 439 aaKnown RBP22.41■■□□□ 1.18
NME3-207ENST00000564628 FAM83BQ5T0W9 1011 aa22.41■■□□□ 1.18
NME3-207ENST00000564628 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.41■■□□□ 1.18
NME3-207ENST00000564628 CNPY2Q9Y2B0 182 aa22.41■■□□□ 1.18
NME3-207ENST00000564628 MYH4Q9Y623 1939 aa22.41■■□□□ 1.18
NME3-207ENST00000564628 SMCHD1A6NHR9 2005 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 A0A1W2PQ45 241 aaPredicted RBP22.4■■□□□ 1.18
NME3-207ENST00000564628 A0A1W2PQY0 241 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 KIAA0355O15063 1070 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 PGK1P00558 417 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 FGAP02671 866 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 TAL1P17542 331 aaPredicted RBP22.4■■□□□ 1.18
NME3-207ENST00000564628 SKAP1Q86WV1 359 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 TSEN34Q9BSV6 310 aaKnown RBP22.4■■□□□ 1.18
NME3-207ENST00000564628 TEX13BQ9BXU2 312 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 IL25Q9H293 177 aa22.4■■□□□ 1.18
NME3-207ENST00000564628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.4■■□□□ 1.18
NME3-207ENST00000564628 PLIN4Q96Q06 1357 aa22.39■■□□□ 1.18
NME3-207ENST00000564628 RAD50Q92878 1312 aa22.39■■□□□ 1.18
NME3-207ENST00000564628 ADAMTS4O75173 837 aa22.39■■□□□ 1.17
NME3-207ENST00000564628 SLF1Q9BQI6 1058 aa22.39■■□□□ 1.17
NME3-207ENST00000564628 ZNF287Q9HBT7 754 aa22.39■■□□□ 1.17
NME3-207ENST00000564628 NYAP2Q9P242 653 aa22.39■■□□□ 1.17
NME3-207ENST00000564628 SYNGAP1Q96PV0 1343 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 TMEM265A0A087WTH1 108 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 RAD21O60216 631 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 SLC3A2P08195 630 aaKnown RBP22.38■■□□□ 1.17
NME3-207ENST00000564628 ITGB8P26012 769 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 CHMLP26374 656 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 MAMDC4Q6UXC1 1216 aa22.38■■□□□ 1.17
NME3-207ENST00000564628 ANKRD33Q7Z3H0 272 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms