RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 ATP11BQ9Y2G3 1177 aa20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 UNC80Q8N2C7 3258 aa20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 LAMA4Q16363 1823 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 TRIM6-TRIM34B2RNG4 842 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 VWA5AO00534 786 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 TSPY3P0CV98 308 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 TSPY8P0CW00 308 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ADORA2AP29274 412 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 CTDSPL2Q05D32 466 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 NMIQ13287 307 aaPredicted RBP20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 MCMDC2Q4G0Z9 681 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 FAM47AQ5JRC9 791 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 NCAPG2Q86XI2 1143 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 REPS2Q8NFH8 660 aa20.69■□□□□ 0.9
MAP1LC3B-204ENST00000563720 TTLL1O95922 423 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 TFAP4Q01664 338 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ALX1Q15699 326 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 GJC2Q5T442 439 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 RILPL2Q969X0 211 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 CDX2Q99626 313 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 INCENPQ9NQS7 918 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ANAPC4Q9UJX5 808 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ZNF214Q9UL59 606 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 SYNPO2Q9UMS6 1093 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 TACC3Q9Y6A5 838 aa20.68■□□□□ 0.9
MAP1LC3B-204ENST00000563720 SMCHD1A6NHR9 2005 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 COBLO75128 1261 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 SHHQ15465 462 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 DPP9Q86TI2 863 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ZNF589Q86UQ0 364 aaPredicted RBP20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 RIOX2Q8IUF8 465 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ABRAQ8N0Z2 381 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 LRRC47Q8N1G4 583 aaKnown RBP20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ARRDC4Q8NCT1 418 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 GMCL1P1Q8NEA9 526 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 SLF1Q9BQI6 1058 aa20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 PRDM5Q9NQX1 630 aaPredicted RBP20.67■□□□□ 0.9
MAP1LC3B-204ENST00000563720 KBTBD13C9JR72 458 aa20.66■□□□□ 0.9
MAP1LC3B-204ENST00000563720 SLC25A27O95847 323 aa20.66■□□□□ 0.9
MAP1LC3B-204ENST00000563720 TRPV1Q8NER1 839 aa20.66■□□□□ 0.9
MAP1LC3B-204ENST00000563720 MAFAQ8NHW3 353 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3B-204ENST00000563720 CCDC171Q6TFL3 1326 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 FGAP02671 866 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 MYCNP04198 464 aaPredicted RBP20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 FGRP09769 529 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 HSPD1P10809 573 aaKnown RBP20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 CYBAP13498 195 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 STAT3P40763 770 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 OLFML2BQ68BL8 750 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 SLC39A5Q6ZMH5 540 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 SEMA6BQ9H3T3 888 aa20.65■□□□□ 0.9
MAP1LC3B-204ENST00000563720 ZMYM6O95789 1325 aa20.64■□□□□ 0.89
MAP1LC3B-204ENST00000563720 FCER1AP12319 257 aa20.64■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SDSP20132 328 aa20.64■□□□□ 0.89
MAP1LC3B-204ENST00000563720 C9orf50Q5SZB4 431 aa20.64■□□□□ 0.89
MAP1LC3B-204ENST00000563720 ANO1Q5XXA6 986 aa20.64■□□□□ 0.89
MAP1LC3B-204ENST00000563720 PRPF38AQ8NAV1 312 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-204ENST00000563720 IL17RBQ9NRM6 502 aa20.64■□□□□ 0.89
MAP1LC3B-204ENST00000563720 MCM3APO60318 1980 aa20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 ORC4O43929 436 aa20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 NMT2O60551 498 aa20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 IRX6P78412 446 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SLFN13Q68D06 897 aa20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 BADQ92934 168 aa20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 MMP19Q99542 508 aa20.63■□□□□ 0.89
MAP1LC3B-204ENST00000563720 DNAH12Q6ZR08 3092 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 COPB2P35606 906 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 TRIM60Q495X7 471 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 MYLIPQ8WY64 445 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 MAML3Q96JK9 1138 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 TEX13BQ9BXU2 312 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SLC5A4Q9NY91 659 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 FEM1BQ9UK73 627 aa20.62■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SEPT4O43236 478 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 RANBP6O60518 1105 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 BMP3P12645 472 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 NOVP48745 357 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SMAD3P84022 425 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 PPP4R3BQ5MIZ7 849 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SNRNP48Q6IEG0 339 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 KIFC2Q96AC6 838 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SLC38A10Q9HBR0 1119 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 STX8Q9UNK0 236 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 RIPK3Q9Y572 518 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 LTBP2Q14767 1821 aa20.61■□□□□ 0.89
MAP1LC3B-204ENST00000563720 ATP2A1O14983 1001 aa20.6■□□□□ 0.89
MAP1LC3B-204ENST00000563720 PGK2P07205 417 aa20.6■□□□□ 0.89
MAP1LC3B-204ENST00000563720 PDE4AP27815 886 aa20.6■□□□□ 0.89
MAP1LC3B-204ENST00000563720 KCTD2Q14681 263 aa20.6■□□□□ 0.89
MAP1LC3B-204ENST00000563720 GMCL1Q96IK5 515 aa20.6■□□□□ 0.89
MAP1LC3B-204ENST00000563720 PDLIM7Q9NR12 457 aa20.6■□□□□ 0.89
MAP1LC3B-204ENST00000563720 LAMA2P24043 3122 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3B-204ENST00000563720 ZBED4O75132 1171 aa20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 FOSL2P15408 326 aa20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 ADCYAP1R1P41586 468 aa20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 HAND2P61296 217 aa20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 ZNF792Q3KQV3 632 aa20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 CWC27Q6UX04 472 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms