RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.12	□□□□□ -0.79	7e-12	■□□□□ 8.9
CKLF-208	ENST00000563092	PBX4	Q9BYU1	374 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	TANGO6	Q9C0B7	1094 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	ANTXR1	Q9H6X2	564 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	TMEM39A	Q9NV64	488 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	RAPGEFL1	Q9UHV5	662 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	TNN	Q9UQP3	1299 aa		10.12	□□□□□ -0.79
CKLF-208	ENST00000563092	SYNRG	Q9UMZ2	1314 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	MOXD2P	A6NHM9	499 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	AKR1A1	P14550	325 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	HOXB1	P14653	301 aa	Predicted RBP	10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	CST5	P28325	142 aa	Predicted RBP	10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	PBX2	P40425	430 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	MAP3K12	Q12852	859 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	ADGRE1	Q14246	886 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	MAMDC4	Q6UXC1	1216 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	TMEM179	Q6ZVK1	233 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	NCAPG2	Q86XI2	1143 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	ZNF710	Q8N1W2	664 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	SLC44A5	Q8NCS7	719 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	REPS2	Q8NFH8	660 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	ADAMTS19	Q8TE59	1207 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	VCPKMT	Q9H867	229 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	THEG	Q9P2T0	379 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	ZNF214	Q9UL59	606 aa	Predicted RBP	10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	NCOR1	O75376	2440 aa		10.11	□□□□□ -0.79
CKLF-208	ENST00000563092	ELP1	O95163	1332 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	DNAJC25-GNG10	A0A024R161	153 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	DCDC2C	A8MYV0	355 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	WDR46	O15213	610 aa	Known RBP	10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	FLOT1	O75955	427 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	PGK2	P07205	417 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	NKX3-2	P78367	333 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	MRPS5	P82675	430 aa	Known RBP	10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	NUP133	Q8WUM0	1156 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	LENG1	Q96BZ8	264 aa	Predicted RBP	10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	MMP19	Q99542	508 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	SWAP70	Q9UH65	585 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	TRANK1	O15050	2925 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	SMCHD1	A6NHR9	2005 aa		10.1	□□□□□ -0.79
CKLF-208	ENST00000563092	SYNGAP1	Q96PV0	1343 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	NAV1	Q8NEY1	1877 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	TCRBV5S4A2T	A0A5A2	114 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	GRXCR1	A8MXD5	290 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	VWA5A	O00534	786 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	IPO8	O15397	1037 aa	Known RBP	10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	SURF6	O75683	361 aa	Known RBP	10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	SNAI1	O95863	264 aa	Predicted RBP	10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	POLR3D	P05423	398 aa	Predicted RBP	10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	COPB2	P35606	906 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	PPIG	Q13427	754 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	PLS1	Q14651	629 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	KCNA10	Q16322	511 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	UPF3A	Q9H1J1	476 aa	Known RBP	10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	PRDM12	Q9H4Q4	367 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	STARD7	Q9NQZ5	370 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	MCM9	Q9NXL9	1143 aa		10.09	□□□□□ -0.79
CKLF-208	ENST00000563092	MROH7	Q68CQ1	1323 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	MAGEB6P1	A0A0J9YX57	407 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	MYADML2	A6NDP7	307 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	CTAGE5	O15320	804 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	ADCY6	O43306	1168 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	DUSP11	O75319	330 aa	Known RBP	10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	BMP1	P13497	986 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	AKR1B1	P15121	316 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	CSF2RA	P15509	400 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	PDE6A	P16499	860 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	STAT3	P40763	770 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	ICA1	Q05084	483 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	KCTD2	Q14681	263 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	CCDC174	Q6PII3	467 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	CLEC10A	Q8IUN9	316 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	FAM126B	Q8IXS8	530 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	SPICE1	Q8N0Z3	855 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	SLC43A3	Q8NBI5	491 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	HERVK_113	Q902F9	699 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	CCDC17	Q96LX7	622 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	UHRF1	Q96T88	793 aa	Predicted RBP	10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	GAS2L1	Q99501	681 aa	Predicted RBP	10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	SH2D4A	Q9H788	454 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	ARHGEF10L	Q9HCE6	1279 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	FBXO28	Q9NVF7	368 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	FAM184B	Q9ULE4	1060 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	PPP1R9A	Q9ULJ8	1098 aa		10.08	□□□□□ -0.8
CKLF-208	ENST00000563092	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	MPHOSPH10	O00566	681 aa	Known RBP	10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	ATP2A1	O14983	1001 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	BCAR3	O75815	825 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	CD4	P01730	458 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	CYP2D6	P10635	497 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	GJA9	P57773	515 aa		10.07	□□□□□ -0.8
CKLF-208	ENST00000563092	OS9	Q13438	667 aa	Predicted RBP	10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms