RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 SYMPKQ92797 1274 aaKnown RBP18.88■□□□□ 0.61
HERPUD1-205ENST00000562914 DDX11Q96FC9 970 aa18.88■□□□□ 0.61
HERPUD1-205ENST00000562914 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
HERPUD1-205ENST00000562914 SYNPO2Q9UMS6 1093 aa18.88■□□□□ 0.61
HERPUD1-205ENST00000562914 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 RAD21O60216 631 aa18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 ELP1O95163 1332 aa18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 TAL1P17542 331 aaPredicted RBP18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 ITGB8P26012 769 aa18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 MYLIPQ8WY64 445 aa18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 ZNF287Q9HBT7 754 aa18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 PLXNA1Q9UIW2 1896 aa18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 SYNRGQ9UMZ2 1314 aa18.87■□□□□ 0.61
HERPUD1-205ENST00000562914 DNAJC25-GNG10A0A024R161 153 aa18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 DUSP11O75319 330 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 CST5P28325 142 aaPredicted RBP18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 FAAP100Q0VG06 881 aa18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 SNRNP48Q6IEG0 339 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 KLHDC9Q8NEP7 349 aa18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 GLT1D1Q96MS3 346 aa18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 MKNK2Q9HBH9 465 aa18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 SPC25Q9HBM1 224 aa18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 FBXO40Q9UH90 709 aa18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 CTDP1Q9Y5B0 961 aaPredicted RBP18.86■□□□□ 0.61
HERPUD1-205ENST00000562914 SMCHD1A6NHR9 2005 aa18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 F5H6K3 240 aa18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 ZBED4O75132 1171 aa18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 KLRC3Q07444 240 aa18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 SLFNL1Q499Z3 407 aa18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 LRRCC1Q9C099 1032 aa18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 PUS7LQ9H0K6 701 aaKnown RBP18.85■□□□□ 0.61
HERPUD1-205ENST00000562914 MYH7P12883 1935 aa18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 GREB1LQ9C091 1923 aaPredicted RBP18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 SMIM22K7EJ46 135 aa18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 SNAI1O95863 264 aaPredicted RBP18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 TIMP1P01033 207 aa18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 FDX1P10109 184 aa18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 RASA1P20936 1047 aa18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 OAZ1P54368 228 aa18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 CCSAPQ6IQ19 270 aaPredicted RBP18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 STRBPQ96SI9 672 aaKnown RBP18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 ABHD16BQ9H3Z7 469 aa18.84■□□□□ 0.61
HERPUD1-205ENST00000562914 DNAJB2P25686 324 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 EPHB4P54760 987 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 PPIGQ13427 754 aaKnown RBP eCLIP18.83■□□□□ 0.63e-7■■□□□ 11.9
HERPUD1-205ENST00000562914 KCNA10Q16322 511 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 MFSD5Q6N075 450 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 CHST13Q8NET6 341 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 BCL11AQ9H165 835 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 ZHX1Q9UKY1 873 aaPredicted RBP18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 TBX21Q9UL17 535 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 COG6Q9Y2V7 657 aa18.83■□□□□ 0.6
HERPUD1-205ENST00000562914 NDUFB10O96000 172 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 GNAT2P19087 354 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 ACVR2BQ13705 512 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 MKL1Q969V6 931 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 UPF3AQ9H1J1 476 aaKnown RBP18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 SLC38A10Q9HBR0 1119 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 FEM1BQ9UK73 627 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 RIPK3Q9Y572 518 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 CDH23Q9H251 3354 aa18.82■□□□□ 0.6
HERPUD1-205ENST00000562914 GSG1L2A8MUP6 293 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 ZFYP08048 801 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 C6orf222P0C671 652 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 CDK7P50613 346 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 GJA9P57773 515 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 LRRFIP1Q32MZ4 808 aaKnown RBP18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 ZNF444Q8N0Y2 327 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 ANKRD35Q8N283 1001 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 TMEM199Q8N511 208 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 KBTBD3Q8NAB2 608 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 APPBP2Q92624 585 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 LENG1Q96BZ8 264 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 NUP88Q99567 741 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 ECHDC1Q9NTX5 307 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 VCANP13611 3396 aa18.81■□□□□ 0.6
HERPUD1-205ENST00000562914 IGKV6D-41A0A0C4DH26 115 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 TLR3O15455 904 aaKnown RBP18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 CHGBP05060 677 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 ASGR1P07306 291 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 NKX3-2P78367 333 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 CPXCR1Q8N123 301 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 GMCL1P1Q8NEA9 526 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 GPATCH3Q96I76 525 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 SEZ6LQ9BYH1 1024 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 ZNF576Q9H609 170 aa18.8■□□□□ 0.6
HERPUD1-205ENST00000562914 EYSQ5T1H1 3165 aa18.79■□□□□ 0.6
HERPUD1-205ENST00000562914 MINDY4BA8MYZ0 360 aa18.79■□□□□ 0.6
HERPUD1-205ENST00000562914 ARVCFO00192 962 aa18.79■□□□□ 0.6
HERPUD1-205ENST00000562914 TTLL1O95922 423 aa18.79■□□□□ 0.6
HERPUD1-205ENST00000562914 GRIN2CQ14957 1233 aa18.79■□□□□ 0.6
HERPUD1-205ENST00000562914 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
HERPUD1-205ENST00000562914 PPP4R3BQ5MIZ7 849 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms