RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 CCL5P13501 91 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 STAT3P40763 770 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 STAT2P52630 851 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 CCDC96Q2M329 555 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 STOX1Q6ZVD7 989 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 CYB5R4Q7L1T6 521 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 RIOX2Q8IUF8 465 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 TTC14Q96N46 770 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 APBA2Q99767 749 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 KRT23Q9C075 422 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 CNNM2Q9H8M5 875 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 PCDH10Q9P2E7 1040 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 IVNS1ABPQ9Y6Y0 642 aa18.1■□□□□ 0.49
CCNDBP1-203ENST00000562553 PLXNA1Q9UIW2 1896 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 CDC45O75419 566 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 HMGCRP04035 888 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 NT5C2P49902 561 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 IKQ13123 557 aaPredicted RBP18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 KIAA1211Q6ZU35 1233 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 IQCA1Q86XH1 822 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 CPXCR1Q8N123 301 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 ENAHQ8N8S7 591 aaPredicted RBP18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 NPLOC4Q8TAT6 608 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 DCAF4Q8WV16 495 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 ZSCAN10Q96SZ4 725 aaPredicted RBP18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 MROH8Q9H579 483 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 SLC38A10Q9HBR0 1119 aa18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 RAVER2Q9HCJ3 691 aaKnown RBP18.09■□□□□ 0.49
CCNDBP1-203ENST00000562553 TNKSO95271 1327 aa18.08■□□□□ 0.49
CCNDBP1-203ENST00000562553 FRMPD2Q68DX3 1309 aaPredicted RBP18.08■□□□□ 0.49
CCNDBP1-203ENST00000562553 E7EWF7 191 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 ZBED4O75132 1171 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 SLC25A27O95847 323 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 PDHBP11177 359 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 ZKSCAN1P17029 563 aaPredicted RBP18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 ADORA2AP29274 412 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 FAM160B2Q86V87 743 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 DGKHQ86XP1 1220 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 CHURC1Q8WUH1 139 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 TEX13BQ9BXU2 312 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 RNF208Q9H0X6 261 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 ANO2Q9NQ90 1003 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 FLRT1Q9NZU1 646 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 RIPK3Q9Y572 518 aa18.08■□□□□ 0.48
CCNDBP1-203ENST00000562553 PLA2G6O60733 806 aa18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 COBLO75128 1261 aa18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 SNAP25P60880 206 aa18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 ANKS1AQ92625 1134 aa18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 SHISA4Q96DD7 197 aa18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 GPCPD1Q9NPB8 672 aa18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 PRR12Q9ULL5 1215 aa18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 CTDP1Q9Y5B0 961 aaPredicted RBP18.07■□□□□ 0.48
CCNDBP1-203ENST00000562553 ATP2A1O14983 1001 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 STRNO43815 780 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 HOXC6P09630 235 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 SNHG28P0DPA3 235 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 SLC16A2P36021 539 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 CCDC178Q5BJE1 867 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
CCNDBP1-203ENST00000562553 ZNF536O15090 1300 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 SLC27A2O14975 620 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 GJB1P08034 283 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 FCER1AP12319 257 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 GJA8P48165 433 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 ZNF543Q08ER8 600 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 TRDNQ13061 729 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 SEC23AQ15436 765 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 MAP3K21Q5TCX8 1036 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 BTNL9Q6UXG8 535 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 DPP9Q86TI2 863 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 TRMT44Q8IYL2 757 aaKnown RBP18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 ABRAQ8N0Z2 381 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 MMP19Q99542 508 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 UBAC1Q9BSL1 405 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 KAT14Q9H8E8 782 aa18.05■□□□□ 0.48
CCNDBP1-203ENST00000562553 PGK2P07205 417 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 GOLGA8HP0CJ92 632 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 PRKAR2AP13861 404 aaKnown RBP18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 TAL1P17542 331 aaPredicted RBP18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 CAPN2P17655 700 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 COPB2P35606 906 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 OAZ1P54368 228 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 ANTXR2P58335 489 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 CACNB2Q08289 660 aaPredicted RBP18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 NECTIN1Q15223 517 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 SYDE2Q5VT97 1194 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 CREB3L3Q68CJ9 461 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 CCDC174Q6PII3 467 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 CASC1Q6TDU7 716 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 CHST3Q7LGC8 479 aa18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 RALYLQ86SE5 291 aaKnown RBP18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 MB21D2Q8IYB1 491 aaPredicted RBP18.04■□□□□ 0.48
CCNDBP1-203ENST00000562553 NCOA7Q8NI08 942 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms