RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
HERC1-212ENST00000561348 TNKSO95271 1327 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 LAMA4Q16363 1823 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 POTEFA5A3E0 1075 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 IFIT3O14879 490 aaKnown RBP11.88□□□□□ -0.51
HERC1-212ENST00000561348 GOLGA8HP0CJ92 632 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 CCL5P13501 91 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 ZKSCAN1P17029 563 aaPredicted RBP11.88□□□□□ -0.51
HERC1-212ENST00000561348 RGS2P41220 211 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 CCL14Q16627 93 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
HERC1-212ENST00000561348 TTBK2Q6IQ55 1244 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 CYB5R4Q7L1T6 521 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 NCOA7Q8NI08 942 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 SOCS4Q8WXH5 440 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 ZNF333Q96JL9 665 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 MMP19Q99542 508 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 LSG1Q9H089 658 aaKnown RBP11.88□□□□□ -0.51
HERC1-212ENST00000561348 GJD2Q9UKL4 321 aa11.88□□□□□ -0.51
HERC1-212ENST00000561348 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
HERC1-212ENST00000561348 PGK2P07205 417 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 FCER1AP12319 257 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 ALAS1P13196 640 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 EN2P19622 333 aaPredicted RBP11.87□□□□□ -0.51
HERC1-212ENST00000561348 PTPREP23469 700 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 ADORA2AP29274 412 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 CNGA1P29973 690 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 TRIM32Q13049 653 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 KCTD2Q14681 263 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 ENAHQ8N8S7 591 aaPredicted RBP11.87□□□□□ -0.51
HERC1-212ENST00000561348 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 DCAF4Q8WV16 495 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 GMCL1Q96IK5 515 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 TTC14Q96N46 770 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 MROH8Q9H579 483 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 VAT1LQ9HCJ6 419 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 TCP11L1Q9NUJ3 509 aa11.87□□□□□ -0.51
HERC1-212ENST00000561348 SLC15A5A6NIM6 579 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 SLC27A2O14975 620 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 SLC25A27O95847 323 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 TAL1P17542 331 aaPredicted RBP11.86□□□□□ -0.51
HERC1-212ENST00000561348 IRF5Q13568 498 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 SART3Q15020 963 aaKnown RBP11.86□□□□□ -0.51
HERC1-212ENST00000561348 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 RNF20Q5VTR2 975 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 CREB3L3Q68CJ9 461 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 NFXL1Q6ZNB6 911 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 STOX1Q6ZVD7 989 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 TRIB2Q92519 343 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 AGBL1Q96MI9 1066 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 CPVLQ9H3G5 476 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 PRR12Q9ULL5 1215 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 SYNPO2Q9UMS6 1093 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 RIPK3Q9Y572 518 aa11.86□□□□□ -0.51
HERC1-212ENST00000561348 TFRCP02786 760 aaKnown RBP11.85□□□□□ -0.51
HERC1-212ENST00000561348 HMGCRP04035 888 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 PDHBP11177 359 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
HERC1-212ENST00000561348 MLLT1Q03111 559 aaPredicted RBP11.85□□□□□ -0.51
HERC1-212ENST00000561348 WTAPQ15007 396 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 MORN1Q5T089 497 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 SYDE2Q5VT97 1194 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 MFSD14CQ5VZR4 134 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 DGKHQ86XP1 1220 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 RIOX2Q8IUF8 465 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 ANKRD35Q8N283 1001 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 NUP133Q8WUM0 1156 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 DEFB118Q96PH6 123 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 APBA2Q99767 749 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 LRRC2Q9BYS8 371 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 SLC5A4Q9NY91 659 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
HERC1-212ENST00000561348 CCPG1Q9ULG6 757 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 NAP1L2Q9ULW6 460 aaPredicted RBP11.85□□□□□ -0.51
HERC1-212ENST00000561348 RLFQ13129 1914 aa11.85□□□□□ -0.51
HERC1-212ENST00000561348 PLXNB2O15031 1838 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 PRC1O43663 620 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 STRNO43815 780 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
HERC1-212ENST00000561348 CYP2C19P33261 490 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 FGD1P98174 961 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 ZNF543Q08ER8 600 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 GRB14Q14449 540 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 USH1GQ495M9 461 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 RAB11FIP4Q86YS3 637 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 PIBF1Q8WXW3 757 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms