RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PRKAB2O43741 272 aa22.32■■□□□ 1.16
TPM1-226ENST00000560959 RLBP1P12271 317 aa22.32■■□□□ 1.16
TPM1-226ENST00000560959 ADD2P35612 726 aa22.32■■□□□ 1.16
TPM1-226ENST00000560959 TMEM240Q5SV17 173 aa22.32■■□□□ 1.16
TPM1-226ENST00000560959 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.32■■□□□ 1.16
TPM1-226ENST00000560959 TEX13BQ9BXU2 312 aa22.32■■□□□ 1.16
TPM1-226ENST00000560959 IL1RAPL2Q9NP60 686 aa22.32■■□□□ 1.16
TPM1-226ENST00000560959 USP17L12C9JPN9 530 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 USP17L21D6R901 530 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 ATP2A1O14983 1001 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 C16orf59Q7L2K0 433 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 TMEM199Q8N511 208 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 LENG1Q96BZ8 264 aaPredicted RBP22.31■■□□□ 1.16
TPM1-226ENST00000560959 KIF1BPQ96EK5 621 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 DDX11Q96FC9 970 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 DDRGK1Q96HY6 314 aa22.31■■□□□ 1.16
TPM1-226ENST00000560959 DNAJC2Q99543 621 aaKnown RBP22.31■■□□□ 1.16
TPM1-226ENST00000560959 PARP14Q460N5 1801 aa22.3■■□□□ 1.16
TPM1-226ENST00000560959 MBD4O95243 580 aa22.3■■□□□ 1.16
TPM1-226ENST00000560959 COL9A1P20849 921 aa22.3■■□□□ 1.16
TPM1-226ENST00000560959 FAM83BQ5T0W9 1011 aa22.3■■□□□ 1.16
TPM1-226ENST00000560959 PBX4Q9BYU1 374 aa22.3■■□□□ 1.16
TPM1-226ENST00000560959 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.3■■□□□ 1.16
TPM1-226ENST00000560959 SPC25Q9HBM1 224 aa22.3■■□□□ 1.16
TPM1-226ENST00000560959 ARVCFO00192 962 aa22.29■■□□□ 1.16
TPM1-226ENST00000560959 IFIT2P09913 472 aaKnown RBP22.29■■□□□ 1.16
TPM1-226ENST00000560959 PSRC1Q6PGN9 363 aaPredicted RBP22.29■■□□□ 1.16
TPM1-226ENST00000560959 PRPF38AQ8NAV1 312 aaKnown RBP22.29■■□□□ 1.16
TPM1-226ENST00000560959 ASB2Q96Q27 587 aa22.29■■□□□ 1.16
TPM1-226ENST00000560959 SLF1Q9BQI6 1058 aa22.29■■□□□ 1.16
TPM1-226ENST00000560959 UPF3AQ9H1J1 476 aaKnown RBP22.29■■□□□ 1.16
TPM1-226ENST00000560959 ABHD16BQ9H3Z7 469 aa22.29■■□□□ 1.16
TPM1-226ENST00000560959 ZBED9Q6R2W3 1325 aa22.29■■□□□ 1.16
TPM1-226ENST00000560959 A0A0U1RQG5 324 aaPredicted RBP22.28■■□□□ 1.16
TPM1-226ENST00000560959 ASGR1P07306 291 aa22.28■■□□□ 1.16
TPM1-226ENST00000560959 GJA9P57773 515 aa22.28■■□□□ 1.16
TPM1-226ENST00000560959 NKX3-2P78367 333 aa22.28■■□□□ 1.16
TPM1-226ENST00000560959 ACVR2BQ13705 512 aa22.28■■□□□ 1.16
TPM1-226ENST00000560959 UBE3CQ15386 1083 aa22.28■■□□□ 1.16
TPM1-226ENST00000560959 PAG1Q9NWQ8 432 aa22.28■■□□□ 1.16
TPM1-226ENST00000560959 ZHX1Q9UKY1 873 aaPredicted RBP22.28■■□□□ 1.16
TPM1-226ENST00000560959 CYP2D7A0A087X1C5 515 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 SMIM22K7EJ46 135 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 CSF2RAP15509 400 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 SNRNP48Q6IEG0 339 aaKnown RBP22.27■■□□□ 1.16
TPM1-226ENST00000560959 CTR9Q6PD62 1173 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.27■■□□□ 1.16
TPM1-226ENST00000560959 NYAP2Q9P242 653 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 THEGQ9P2T0 379 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 RIPK3Q9Y572 518 aa22.27■■□□□ 1.16
TPM1-226ENST00000560959 PLXNA1Q9UIW2 1896 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 MYADML2A6NDP7 307 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 TLR3O15455 904 aaKnown RBP22.26■■□□□ 1.15
TPM1-226ENST00000560959 C6orf222P0C671 652 aaPredicted RBP22.26■■□□□ 1.15
TPM1-226ENST00000560959 ATP5JP18859 108 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 PBX2P40425 430 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 MRPS5P82675 430 aaKnown RBP22.26■■□□□ 1.15
TPM1-226ENST00000560959 RAB30Q15771 203 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 FAM126BQ8IXS8 530 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 RPAP2Q8IXW5 612 aaPredicted RBP22.26■■□□□ 1.15
TPM1-226ENST00000560959 FBXO40Q9UH90 709 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 MSRAQ9UJ68 235 aa22.26■■□□□ 1.15
TPM1-226ENST00000560959 COL11A1P12107 1806 aaPredicted RBP22.25■■□□□ 1.15
TPM1-226ENST00000560959 F5H6K3 240 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 RAB11FIP3O75154 756 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 KLRC3Q07444 240 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 GNASQ5JWF2 1037 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 ZNF365Q70YC5 407 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 HERVK_113Q902F9 699 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 VTI1AQ96AJ9 217 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 SEZ6LQ9BYH1 1024 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 PRDM12Q9H4Q4 367 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.25■■□□□ 1.15
TPM1-226ENST00000560959 SLC4A4Q9Y6R1 1079 aa22.25■■□□□ 1.15
TPM1-226ENST00000560959 GRXCR1A8MXD5 290 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 RAD21O60216 631 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 ZBED4O75132 1171 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 CD4P01730 458 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 CCDC144BQ3MJ40 725 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 CHST13Q8NET6 341 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 HAUS7Q99871 368 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 MTIF3Q9H2K0 278 aaKnown RBP22.24■■□□□ 1.15
TPM1-226ENST00000560959 BOLA2Q9H3K6 86 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 IL23AQ9NPF7 189 aa22.24■■□□□ 1.15
TPM1-226ENST00000560959 ARPP21Q9UBL0 812 aaPredicted RBP22.24■■□□□ 1.15
TPM1-226ENST00000560959 OAZ1P54368 228 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 SLFNL1Q499Z3 407 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 SBK1Q52WX2 424 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 ZSCAN25Q6NSZ9 544 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 SLC43A3Q8NBI5 491 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 SYNPO2Q9UMS6 1093 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 MYH8P13535 1937 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 CHD9Q3L8U1 2897 aa22.23■■□□□ 1.15
TPM1-226ENST00000560959 ADCY6O43306 1168 aa22.22■■□□□ 1.15
TPM1-226ENST00000560959 HMMRO75330 724 aa22.22■■□□□ 1.15
TPM1-226ENST00000560959 ADGRE1Q14246 886 aa22.22■■□□□ 1.15
TPM1-226ENST00000560959 ANKRD35Q8N283 1001 aa22.22■■□□□ 1.15
TPM1-226ENST00000560959 PPM1EQ8WY54 764 aa22.22■■□□□ 1.15
TPM1-226ENST00000560959 MKL1Q969V6 931 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms