RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PPP1R12CQ9BZL4 782 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 C1orf115Q9H7X2 142 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 DCP1AQ9NPI6 582 aaPredicted RBP12.02□□□□□ -0.49
TPM1-225ENST00000560679 CNPY2Q9Y2B0 182 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 NOP58Q9Y2X3 529 aaKnown RBP12.02□□□□□ -0.49
TPM1-225ENST00000560679 ELP1O95163 1332 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 MROH7Q68CQ1 1323 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 SYNGAP1Q96PV0 1343 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 LRRC37A2A6NM11 1700 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 TCRBV5S4A2TA0A5A2 114 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 VWA5AO00534 786 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 BMP1P13497 986 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 PDE6AP16499 860 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 RAB30Q15771 203 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 TMED8Q6PL24 325 aaPredicted RBP12.01□□□□□ -0.49
TPM1-225ENST00000560679 LCORLQ8N3X6 602 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 TMEM57Q8N5G2 664 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 HERVK_113Q902F9 699 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 FGD4Q96M96 766 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 GLT1D1Q96MS3 346 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 CRNKL1Q9BZJ0 848 aaKnown RBP12.01□□□□□ -0.49
TPM1-225ENST00000560679 UPF3AQ9H1J1 476 aaKnown RBP12.01□□□□□ -0.49
TPM1-225ENST00000560679 SWAP70Q9UH65 585 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 ZHX1Q9UKY1 873 aaPredicted RBP12.01□□□□□ -0.49
TPM1-225ENST00000560679 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 UMODL1Q5DID0 1318 aa12.01□□□□□ -0.49
TPM1-225ENST00000560679 DNAJC25-GNG10A0A024R161 153 aa12□□□□□ -0.49
TPM1-225ENST00000560679 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
TPM1-225ENST00000560679 ARVCFO00192 962 aa12□□□□□ -0.49
TPM1-225ENST00000560679 CTAGE5O15320 804 aa12□□□□□ -0.49
TPM1-225ENST00000560679 DUSP11O75319 330 aaKnown RBP12□□□□□ -0.49
TPM1-225ENST00000560679 CD4P01730 458 aa12□□□□□ -0.49
TPM1-225ENST00000560679 ASGR1P07306 291 aa12□□□□□ -0.49
TPM1-225ENST00000560679 CYP2C18P33260 490 aa12□□□□□ -0.49
TPM1-225ENST00000560679 STAT3P40763 770 aa12□□□□□ -0.49
TPM1-225ENST00000560679 KCNQ1P51787 676 aa12□□□□□ -0.49
TPM1-225ENST00000560679 ATP8B2P98198 1209 aa12□□□□□ -0.49
TPM1-225ENST00000560679 CCDC174Q6PII3 467 aa12□□□□□ -0.49
TPM1-225ENST00000560679 MAMDC4Q6UXC1 1216 aa12□□□□□ -0.49
TPM1-225ENST00000560679 TMEM199Q8N511 208 aa12□□□□□ -0.49
TPM1-225ENST00000560679 MSL3Q8N5Y2 521 aaKnown RBP12□□□□□ -0.49
TPM1-225ENST00000560679 IL27Q8NEV9 243 aa12□□□□□ -0.49
TPM1-225ENST00000560679 VWCEQ96DN2 955 aa12□□□□□ -0.49
TPM1-225ENST00000560679 SH2D4AQ9H788 454 aa12□□□□□ -0.49
TPM1-225ENST00000560679 IL23AQ9NPF7 189 aa12□□□□□ -0.49
TPM1-225ENST00000560679 MSRAQ9UJ68 235 aa12□□□□□ -0.49
TPM1-225ENST00000560679 FAM184BQ9ULE4 1060 aa12□□□□□ -0.49
TPM1-225ENST00000560679 CYP2D7A0A087X1C5 515 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 C6orf222P0C671 652 aaPredicted RBP11.99□□□□□ -0.49
TPM1-225ENST00000560679 EEF2P13639 858 aaKnown RBP11.99□□□□□ -0.49
TPM1-225ENST00000560679 RABGGTBP53611 331 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 GJA9P57773 515 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 FAM83BQ5T0W9 1011 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 C1QTNF1Q9BXJ1 281 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 ZNF532Q9HCE3 1301 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 PRRC2BQ5JSZ5 2229 aaKnown RBP11.99□□□□□ -0.49
TPM1-225ENST00000560679 PIEZO1Q92508 2521 aa11.99□□□□□ -0.49
TPM1-225ENST00000560679 ASTN1O14525 1302 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 APBB1O00213 710 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 PRKAB2O43741 272 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 MYOGP15173 224 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 COPB2P35606 906 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 ACVR2BQ13705 512 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 SLFNL1Q499Z3 407 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 SLC9C2Q5TAH2 1124 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 MICALL1Q8N3F8 863 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
TPM1-225ENST00000560679 LRFN3Q9BTN0 628 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 KATNBL1Q9H079 304 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 ARMT1Q9H993 441 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 SLC28A3Q9HAS3 691 aa11.98□□□□□ -0.49
TPM1-225ENST00000560679 ERC2O15083 957 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 IPO8O15397 1037 aaKnown RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 CDK8P49336 464 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 NKX3-2P78367 333 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 CCDC144BQ3MJ40 725 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 SNRNP48Q6IEG0 339 aaKnown RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM1-225ENST00000560679 OTOP2Q7RTS6 562 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 ZNF467Q7Z7K2 595 aaPredicted RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 AACSQ86V21 672 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 SLC43A3Q8NBI5 491 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 PCSK9Q8NBP7 692 aaKnown RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM1-225ENST00000560679 TEX13BQ9BXU2 312 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 WNT8AQ9H1J5 351 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 EPHX3Q9H6B9 360 aa11.97□□□□□ -0.49
TPM1-225ENST00000560679 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 COL4A4P53420 1690 aaPredicted RBP11.97□□□□□ -0.49
TPM1-225ENST00000560679 GRIN2DO15399 1336 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.96□□□□□ -0.49
TPM1-225ENST00000560679 EPOPA6NHQ4 379 aa11.96□□□□□ -0.49
TPM1-225ENST00000560679 TLR3O15455 904 aaKnown RBP11.96□□□□□ -0.49
TPM1-225ENST00000560679 PTGS1P23219 599 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms