RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CYP2D7A0A087X1C5 515 aa23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 MYADML2A6NDP7 307 aa23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 GOLIM4O00461 696 aa23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 DUSP11O75319 330 aaKnown RBP23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 CST5P28325 142 aaPredicted RBP23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 C16orf86Q6ZW13 317 aa23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 KANSL2Q9H9L4 492 aa23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 IL1RAPL2Q9NP60 686 aa23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 IRX5P78411 483 aaPredicted RBP23.84■■□□□ 1.41
RABGGTA-214ENST00000560163 PPIGQ13427 754 aaKnown RBP eCLIP23.84■■□□□ 1.412e-8■■■□□ 17.5
RABGGTA-214ENST00000560163 SLFNL1Q499Z3 407 aa23.84■■□□□ 1.41
RABGGTA-214ENST00000560163 ITPRIPQ8IWB1 547 aa23.84■■□□□ 1.41
RABGGTA-214ENST00000560163 RHPN1Q8TCX5 695 aa23.84■■□□□ 1.41
RABGGTA-214ENST00000560163 ASB2Q96Q27 587 aa23.84■■□□□ 1.41
RABGGTA-214ENST00000560163 PRDM12Q9H4Q4 367 aa23.84■■□□□ 1.41
RABGGTA-214ENST00000560163 USP17L12C9JPN9 530 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 USP17L21D6R901 530 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 ADCY6O43306 1168 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 CSF2RAP15509 400 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 ADGRE1Q14246 886 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 FAM83BQ5T0W9 1011 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 GAS2L1Q99501 681 aaPredicted RBP23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 RAPGEFL1Q9UHV5 662 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 RIPK3Q9Y572 518 aa23.83■■□□□ 1.41
RABGGTA-214ENST00000560163 MROH7Q68CQ1 1323 aa23.83■■□□□ 1.4
RABGGTA-214ENST00000560163 PPM1EQ8WY54 764 aa23.82■■□□□ 1.4
RABGGTA-214ENST00000560163 GLT1D1Q96MS3 346 aa23.82■■□□□ 1.4
RABGGTA-214ENST00000560163 DNAJC2Q99543 621 aaKnown RBP23.82■■□□□ 1.4
RABGGTA-214ENST00000560163 GOPCQ9HD26 462 aa23.82■■□□□ 1.4
RABGGTA-214ENST00000560163 MBD4O95243 580 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 ASGR1P07306 291 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 ADD2P35612 726 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 CCDC174Q6PII3 467 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 ZNF365Q70YC5 407 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 ZNF467Q7Z7K2 595 aaPredicted RBP23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 FTSJ3Q8IY81 847 aaKnown RBP23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 TEX13BQ9BXU2 312 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 UPF3AQ9H1J1 476 aaKnown RBP23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 THEGQ9P2T0 379 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 TRANK1O15050 2925 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 NCOR1O75376 2440 aa23.81■■□□□ 1.4
RABGGTA-214ENST00000560163 ARVCFO00192 962 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 GJA9P57773 515 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 ACVR2BQ13705 512 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 HSP90AB4PQ58FF6 505 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 CCDC129Q6ZRS4 1044 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 FAM126BQ8IXS8 530 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 TMEM199Q8N511 208 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 PCSK9Q8NBP7 692 aaKnown RBP23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 ZHX1Q9UKY1 873 aaPredicted RBP23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 GREB1LQ9C091 1923 aaPredicted RBP23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 ZBED9Q6R2W3 1325 aa23.8■■□□□ 1.4
RABGGTA-214ENST00000560163 MYO9BQ13459 2157 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 ATP2A1O14983 1001 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 CTAGE5O15320 804 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 ACRP10323 421 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 SNRNP48Q6IEG0 339 aaKnown RBP23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 ADAMTS19Q8TE59 1207 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 DDX11Q96FC9 970 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 FGD4Q96M96 766 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 SLF1Q9BQI6 1058 aa23.79■■□□□ 1.4
RABGGTA-214ENST00000560163 A0A0U1RQG5 324 aaPredicted RBP23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 CD4P01730 458 aa23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 CHGBP05060 677 aa23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 C6orf222P0C671 652 aaPredicted RBP23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 NKX3-2P78367 333 aa23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 MRPS5P82675 430 aaKnown RBP23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 CTR9Q6PD62 1173 aa23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 PSRC1Q6PGN9 363 aaPredicted RBP23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 CLASRPQ8N2M8 674 aaKnown RBP23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 HERVK_113Q902F9 699 aa23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 NUP88Q99567 741 aaPredicted RBP23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 ABHD16BQ9H3Z7 469 aa23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.78■■□□□ 1.4
RABGGTA-214ENST00000560163 CCDC144BQ3MJ40 725 aa23.77■■□□□ 1.4
RABGGTA-214ENST00000560163 PRPF38AQ8NAV1 312 aaKnown RBP23.77■■□□□ 1.4
RABGGTA-214ENST00000560163 PAG1Q9NWQ8 432 aa23.77■■□□□ 1.4
RABGGTA-214ENST00000560163 CXXC1Q9P0U4 656 aaPredicted RBP23.77■■□□□ 1.4
RABGGTA-214ENST00000560163 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
RABGGTA-214ENST00000560163 AMOTL1Q8IY63 956 aa23.76■■□□□ 1.39
RABGGTA-214ENST00000560163 KIF1BPQ96EK5 621 aa23.76■■□□□ 1.39
RABGGTA-214ENST00000560163 PPP1R12CQ9BZL4 782 aa23.76■■□□□ 1.39
RABGGTA-214ENST00000560163 KATNBL1Q9H079 304 aa23.76■■□□□ 1.39
RABGGTA-214ENST00000560163 IL23AQ9NPF7 189 aa23.76■■□□□ 1.39
RABGGTA-214ENST00000560163 MCM3APO60318 1980 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 F5H6K3 240 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 RAD21O60216 631 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 KLRC3Q07444 240 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 RAB30Q15771 203 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 CCDC85BQ15834 202 aaPredicted RBP23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 GNASQ5JWF2 1037 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 SLC43A3Q8NBI5 491 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 VTI1AQ96AJ9 217 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 UHRF1Q96T88 793 aaPredicted RBP23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 NYAP2Q9P242 653 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 MSRAQ9UJ68 235 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 GBF1Q92538 1859 aa23.75■■□□□ 1.39
RABGGTA-214ENST00000560163 IFIT2P09913 472 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms