RNA–Protein interactions for RNA: ENST00000559840.1

CYCSP38-201, Transcript of cytochrome c, somatic pseudogene 38, humanhuman

BASIC

Gene CYCSP38, Length 322 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP38-201ENST00000559840 FAM109BQ6ICB4 259 aaPredicted RBP7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 ZSCAN25Q6NSZ9 544 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 SH3RF1Q7Z6J0 888 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 STK11IPQ8N1F8 1099 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 BADQ92934 168 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 OSBP2Q969R2 916 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 TRIM43Q96BQ3 446 aaPredicted RBP7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 STRBPQ96SI9 672 aaKnown RBP7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 SLF1Q9BQI6 1058 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 TINF2Q9BSI4 451 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 TEX13BQ9BXU2 312 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 ECHDC1Q9NTX5 307 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 RNF216Q9NWF9 866 aaPredicted RBP7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 NRBP1Q9UHY1 535 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 RCAN3Q9UKA8 241 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 PHF24Q9UPV7 400 aa7.34□□□□□ -1.23
CYCSP38-201ENST00000559840 PLIN4Q96Q06 1357 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 NCOR1O75376 2440 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 SYNRGQ9UMZ2 1314 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 PLXNA1Q9UIW2 1896 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 IGKV6D-41A0A0C4DH26 115 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 A0A1W2PQ45 241 aaPredicted RBP7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 A0A1W2PQY0 241 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 GSG1L2A8MUP6 293 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 GPAA1O43292 621 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 PQBP1O60828 265 aaKnown RBP7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 ADAMTS4O75173 837 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 AKR1A1P14550 325 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 ITGB8P26012 769 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 COPB2P35606 906 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 TLE2Q04725 743 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 SHHQ15465 462 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 SBK1Q52WX2 424 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 ZNF697Q5TEC3 545 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 SNRNP48Q6IEG0 339 aaKnown RBP7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 KBTBD3Q8NAB2 608 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 APPBP2Q92624 585 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 CHMP4BQ9H444 224 aaKnown RBP7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 DIS3Q9Y2L1 958 aaKnown RBP7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 RIPK3Q9Y572 518 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 REV3LO60673 3130 aa7.33□□□□□ -1.24
CYCSP38-201ENST00000559840 SYNGAP1Q96PV0 1343 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 DNAJC25-GNG10A0A024R161 153 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 MYADML2A6NDP7 307 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 SPDYE4A6NLX3 237 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 MINDY4BA8MYZ0 360 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 F5H6K3 240 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 M0R2C6 588 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 ADCY6O43306 1168 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 PRDM1O75626 825 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 CLTBP09497 229 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 EPHB4P54760 987 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 KLRC3Q07444 240 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 GIMAP6Q6P9H5 292 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 RNF180Q86T96 592 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 LRRC47Q8N1G4 583 aaKnown RBP7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 CEP95Q96GE4 821 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 FGD4Q96M96 766 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 TTYH1Q9H313 450 aaPredicted RBP7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 MKNK2Q9HBH9 465 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 SLC38A10Q9HBR0 1119 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 NYAP2Q9P242 653 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 ZHX1Q9UKY1 873 aaPredicted RBP7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 CNPY2Q9Y2B0 182 aa7.32□□□□□ -1.24
CYCSP38-201ENST00000559840 SMCHD1A6NHR9 2005 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 LRRC37A2A6NM11 1700 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 ATP2A1O14983 1001 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 KIAA0355O15063 1070 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 RNF113AO15541 343 aaKnown RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 SNAI1O95863 264 aaPredicted RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 TDO2P48775 406 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 ACLYP53396 1101 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 IRX5P78411 483 aaPredicted RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 SMAD3P84022 425 aaKnown RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 CPXCR1Q8N123 301 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 MSL3Q8N5Y2 521 aaKnown RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 GMCL1P1Q8NEA9 526 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 KIFC2Q96AC6 838 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 GPATCH3Q96I76 525 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 RNPC3Q96LT9 517 aaKnown RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 CDX2Q99626 313 aaPredicted RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 COL25A1Q9BXS0 654 aaPredicted RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 DCTPP1Q9H773 170 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 RAVER2Q9HCJ3 691 aaKnown RBP7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 MTMR4Q9NYA4 1195 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 TACC3Q9Y6A5 838 aa7.31□□□□□ -1.24
CYCSP38-201ENST00000559840 MOXD2PA6NHM9 499 aa7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 FOXP2O15409 715 aa7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 TTLL1O95922 423 aa7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 ZFYP08048 801 aaPredicted RBP7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 GNAT2P19087 354 aa7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 CST5P28325 142 aaPredicted RBP7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 SLC4A3P48751 1232 aa7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 FAAP100Q0VG06 881 aa7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 CCSAPQ6IQ19 270 aaPredicted RBP7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 MAMDC4Q6UXC1 1216 aa7.3□□□□□ -1.24
CYCSP38-201ENST00000559840 RASGRP2Q7LDG7 609 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms