RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 MS4A1P11836 297 aa13.33□□□□□ -0.28
HERC1-204ENST00000559715 IRX5P78411 483 aaPredicted RBP13.33□□□□□ -0.28
HERC1-204ENST00000559715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
HERC1-204ENST00000559715 KLHDC9Q8NEP7 349 aa13.33□□□□□ -0.28
HERC1-204ENST00000559715 MMP19Q99542 508 aa13.33□□□□□ -0.28
HERC1-204ENST00000559715 CDX2Q99626 313 aaPredicted RBP13.33□□□□□ -0.28
HERC1-204ENST00000559715 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
HERC1-204ENST00000559715 EPB41L4AQ9HCS5 686 aaPredicted RBP13.33□□□□□ -0.28
HERC1-204ENST00000559715 SLC5A4Q9NY91 659 aa13.33□□□□□ -0.28
HERC1-204ENST00000559715 A0A1W2PQ45 241 aaPredicted RBP13.32□□□□□ -0.28
HERC1-204ENST00000559715 A0A1W2PQY0 241 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 F5H6K3 240 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 ATP2A1O14983 1001 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 KLRC3Q07444 240 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 XPNPEP3Q9NQH7 507 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 NYAP2Q9P242 653 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 LCTP09848 1927 aa13.32□□□□□ -0.28
HERC1-204ENST00000559715 MYADML2A6NDP7 307 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 NDUFB10O96000 172 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 SMAD3P84022 425 aaKnown RBP13.31□□□□□ -0.28
HERC1-204ENST00000559715 FAAP100Q0VG06 881 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 GIMAP6Q6P9H5 292 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
HERC1-204ENST00000559715 ANKRD33Q7Z3H0 272 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
HERC1-204ENST00000559715 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 MKL1Q969V6 931 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
HERC1-204ENST00000559715 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
HERC1-204ENST00000559715 CTAGE5O15320 804 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 RARBP10826 455 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 CDK7P50613 346 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 KCTD2Q14681 263 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 TSHZ3Q63HK5 1081 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 C16orf59Q7L2K0 433 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 TSEN34Q9BSV6 310 aaKnown RBP13.3□□□□□ -0.28
HERC1-204ENST00000559715 TEX13BQ9BXU2 312 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 DCTPP1Q9H773 170 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 GOPCQ9HD26 462 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 ECHDC1Q9NTX5 307 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 ARPP21Q9UBL0 812 aaPredicted RBP13.3□□□□□ -0.28
HERC1-204ENST00000559715 PRKAG2Q9UGJ0 569 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 TACC3Q9Y6A5 838 aa13.3□□□□□ -0.28
HERC1-204ENST00000559715 M0R2C6 588 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 FOXP2O15409 715 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 CLTBP09497 229 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 AKR1A1P14550 325 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 ACLYP53396 1101 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 ZNF697Q5TEC3 545 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
HERC1-204ENST00000559715 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
HERC1-204ENST00000559715 TOX2Q96NM4 488 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 SLC38A10Q9HBR0 1119 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 TBX21Q9UL17 535 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 LRRC37A2A6NM11 1700 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 SYNGAP1Q96PV0 1343 aa13.29□□□□□ -0.28
HERC1-204ENST00000559715 GBF1Q92538 1859 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 COPB2P35606 906 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 NKX3-2P78367 333 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 SNRNP48Q6IEG0 339 aaKnown RBP13.28□□□□□ -0.28
HERC1-204ENST00000559715 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
HERC1-204ENST00000559715 RNF180Q86T96 592 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 STK11IPQ8N1F8 1099 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 APPBP2Q92624 585 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 CEP95Q96GE4 821 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 SEC62Q99442 399 aaKnown RBP13.28□□□□□ -0.28
HERC1-204ENST00000559715 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
HERC1-204ENST00000559715 MINDY4BA8MYZ0 360 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 RNF113AO15541 343 aaKnown RBP13.27□□□□□ -0.29
HERC1-204ENST00000559715 GPAA1O43292 621 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
HERC1-204ENST00000559715 DUSP11O75319 330 aaKnown RBP13.27□□□□□ -0.29
HERC1-204ENST00000559715 PRDM1O75626 825 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 CST5P28325 142 aaPredicted RBP13.27□□□□□ -0.29
HERC1-204ENST00000559715 KCNA10Q16322 511 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 RASIP1Q5U651 963 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 MYLIPQ8WY64 445 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 UPF3AQ9H1J1 476 aaKnown RBP13.27□□□□□ -0.29
HERC1-204ENST00000559715 ASTN1O14525 1302 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 ZNF536O15090 1300 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 PLIN4Q96Q06 1357 aa13.27□□□□□ -0.29
HERC1-204ENST00000559715 ACVR2BQ13705 512 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 AMOTL1Q8IY63 956 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 IFNL3Q8IZI9 196 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 CPXCR1Q8N123 301 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 PI4K2BQ8TCG2 481 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 OTUD7AQ8TE49 926 aaPredicted RBP13.26□□□□□ -0.29
HERC1-204ENST00000559715 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 RAVER2Q9HCJ3 691 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms