RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 ZBED9Q6R2W3 1325 aa9.79□□□□□ -0.84
CDK12-205ENST00000559663 DNAJC25-GNG10A0A024R161 153 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 MYADML2A6NDP7 307 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 USP17L12C9JPN9 530 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 USP17L21D6R901 530 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 DUSP11O75319 330 aaKnown RBP9.78□□□□□ -0.84
CDK12-205ENST00000559663 SNAI1O95863 264 aaPredicted RBP9.78□□□□□ -0.84
CDK12-205ENST00000559663 CDK7P50613 346 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 PPIGQ13427 754 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDK12-205ENST00000559663 SLFNL1Q499Z3 407 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 TMEM240Q5SV17 173 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 AKNAD1Q5T1N1 836 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 C16orf59Q7L2K0 433 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
CDK12-205ENST00000559663 KIF1BPQ96EK5 621 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 GLT1D1Q96MS3 346 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 SLF1Q9BQI6 1058 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDK12-205ENST00000559663 PBX4Q9BYU1 374 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 PAG1Q9NWQ8 432 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 CHD7Q9P2D1 2997 aa9.78□□□□□ -0.84
CDK12-205ENST00000559663 ZHX1Q9UKY1 873 aaPredicted RBP9.78□□□□□ -0.84
CDK12-205ENST00000559663 ATP2A1O14983 1001 aa9.77□□□□□ -0.85
CDK12-205ENST00000559663 IFIT2P09913 472 aaKnown RBP9.77□□□□□ -0.85
CDK12-205ENST00000559663 COL9A1P20849 921 aa9.77□□□□□ -0.85
CDK12-205ENST00000559663 PBX2P40425 430 aa9.77□□□□□ -0.85
CDK12-205ENST00000559663 ACVR2BQ13705 512 aa9.77□□□□□ -0.85
CDK12-205ENST00000559663 SNRNP48Q6IEG0 339 aaKnown RBP9.77□□□□□ -0.85
CDK12-205ENST00000559663 PSRC1Q6PGN9 363 aaPredicted RBP9.77□□□□□ -0.85
CDK12-205ENST00000559663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDK12-205ENST00000559663 PCSK9Q8NBP7 692 aaKnown RBP9.77□□□□□ -0.85
CDK12-205ENST00000559663 ATXN2LQ8WWM7 1075 aaKnown RBP9.77□□□□□ -0.85
CDK12-205ENST00000559663 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.85
CDK12-205ENST00000559663 GAS2L1Q99501 681 aaPredicted RBP9.77□□□□□ -0.85
CDK12-205ENST00000559663 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDK12-205ENST00000559663 UPF3AQ9H1J1 476 aaKnown RBP9.77□□□□□ -0.85
CDK12-205ENST00000559663 RIPK3Q9Y572 518 aa9.77□□□□□ -0.85
CDK12-205ENST00000559663 A0A0U1RQG5 324 aaPredicted RBP9.76□□□□□ -0.85
CDK12-205ENST00000559663 GRXCR1A8MXD5 290 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 ARVCFO00192 962 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 ADCY6O43306 1168 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 RAD21O60216 631 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 NDUFB10O96000 172 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 CHGBP05060 677 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 ASGR1P07306 291 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 C6orf222P0C671 652 aaPredicted RBP9.76□□□□□ -0.85
CDK12-205ENST00000559663 CSF2RAP15509 400 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 GJA9P57773 515 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
CDK12-205ENST00000559663 UBE3CQ15386 1083 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 CTR9Q6PD62 1173 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 FAM126BQ8IXS8 530 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 TMEM199Q8N511 208 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 FGD4Q96M96 766 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 NUP88Q99567 741 aaPredicted RBP9.76□□□□□ -0.85
CDK12-205ENST00000559663 BOLA2Q9H3K6 86 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 ABHD16BQ9H3Z7 469 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 PRDM12Q9H4Q4 367 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 SPC25Q9HBM1 224 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
CDK12-205ENST00000559663 THEGQ9P2T0 379 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 ARPP21Q9UBL0 812 aaPredicted RBP9.76□□□□□ -0.85
CDK12-205ENST00000559663 SLC4A4Q9Y6R1 1079 aa9.76□□□□□ -0.85
CDK12-205ENST00000559663 F5H6K3 240 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 APBB1O00213 710 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 ACRP10323 421 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 ATP5JP18859 108 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 NKX3-2P78367 333 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 KLRC3Q07444 240 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 ADGRE1Q14246 886 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 RAB30Q15771 203 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 CCDC144BQ3MJ40 725 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 ZNF365Q70YC5 407 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 PRPF38AQ8NAV1 312 aaKnown RBP9.75□□□□□ -0.85
CDK12-205ENST00000559663 PPM1EQ8WY54 764 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 ASB2Q96Q27 587 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 HAUS7Q99871 368 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 SLC38A10Q9HBR0 1119 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 NYAP2Q9P242 653 aa9.75□□□□□ -0.85
CDK12-205ENST00000559663 CTAGE5O15320 804 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 TLR3O15455 904 aaKnown RBP9.74□□□□□ -0.85
CDK12-205ENST00000559663 ZBED4O75132 1171 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 RAB11FIP3O75154 756 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 HMMRO75330 724 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 CD4P01730 458 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 RASA1P20936 1047 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 OAZ1P54368 228 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 MRPS5P82675 430 aaKnown RBP9.74□□□□□ -0.85
CDK12-205ENST00000559663 SBK1Q52WX2 424 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 GNASQ5JWF2 1037 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 ARMCX2Q7L311 632 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 SIRT2Q8IXJ6 389 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 RPAP2Q8IXW5 612 aaPredicted RBP9.74□□□□□ -0.85
CDK12-205ENST00000559663 ANKRD35Q8N283 1001 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 SLC43A3Q8NBI5 491 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 CHST13Q8NET6 341 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 PANK1Q8TE04 598 aa9.74□□□□□ -0.85
CDK12-205ENST00000559663 ADAMTS19Q8TE59 1207 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms