RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
SMAD3-211ENST00000559460 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
SMAD3-211ENST00000559460 ARHGEF10LQ9HCE6 1279 aa11.82□□□□□ -0.52
SMAD3-211ENST00000559460 LMCD1Q9NZU5 365 aa11.82□□□□□ -0.52
SMAD3-211ENST00000559460 PRRC2BQ5JSZ5 2229 aaKnown RBP11.82□□□□□ -0.52
SMAD3-211ENST00000559460 ZEB2O60315 1214 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 GFRA3O60609 400 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 IL9P15248 144 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 ARID4AP29374 1257 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-211ENST00000559460 GJA9P57773 515 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 TFCP2Q12800 502 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 ITGA7Q13683 1181 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 TMEM132BQ14DG7 1078 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 SEPT2Q15019 361 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 HFE2Q6ZVN8 426 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 RIOX2Q8IUF8 465 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 PHOSPHO2Q8TCD6 241 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 SCLYQ96I15 445 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 NOC4LQ9BVI4 516 aaKnown RBP11.81□□□□□ -0.52
SMAD3-211ENST00000559460 PRKRIP1Q9H875 184 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-211ENST00000559460 CHD9Q3L8U1 2897 aa11.81□□□□□ -0.52
SMAD3-211ENST00000559460 STAT3P40763 770 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 MCAMP43121 646 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 KCNJ6P48051 423 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 ACVR2BQ13705 512 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 TTLL4Q14679 1199 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 GDPD5Q8WTR4 605 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 UPF3AQ9H1J1 476 aaKnown RBP11.8□□□□□ -0.52
SMAD3-211ENST00000559460 WNT8AQ9H1J5 351 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 ABHD16BQ9H3Z7 469 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 COPRSQ9NQ92 184 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 SMCHD1A6NHR9 2005 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 CACNA1AO00555 2505 aa11.8□□□□□ -0.52
SMAD3-211ENST00000559460 POLR3DP05423 398 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-211ENST00000559460 SUPT20HL2P0C7V6 817 aa11.79□□□□□ -0.52
SMAD3-211ENST00000559460 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-211ENST00000559460 CCDC144BQ3MJ40 725 aa11.79□□□□□ -0.52
SMAD3-211ENST00000559460 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
SMAD3-211ENST00000559460 CXCL17Q6UXB2 119 aa11.79□□□□□ -0.52
SMAD3-211ENST00000559460 HERC6Q8IVU3 1022 aa11.79□□□□□ -0.52
SMAD3-211ENST00000559460 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-211ENST00000559460 CRBNQ96SW2 442 aa11.79□□□□□ -0.52
SMAD3-211ENST00000559460 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
SMAD3-211ENST00000559460 FTOQ9C0B1 505 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMAD3-211ENST00000559460 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-211ENST00000559460 CTDP1Q9Y5B0 961 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-211ENST00000559460 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 WDR46O15213 610 aaKnown RBP11.78□□□□□ -0.52
SMAD3-211ENST00000559460 RAD21O60216 631 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 B4GALT4O60513 344 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 IGSF3O75054 1194 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 SNAI1O95863 264 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-211ENST00000559460 CYP7A1P22680 504 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 DYNLL1P63167 89 aaKnown RBP11.78□□□□□ -0.52
SMAD3-211ENST00000559460 BEX3Q00994 111 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 ADGRA1Q86SQ6 560 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 SUGP1Q8IWZ8 645 aaKnown RBP11.78□□□□□ -0.52
SMAD3-211ENST00000559460 AP5M1Q9H0R1 490 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 TRPV6Q9H1D0 765 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 FOCADQ5VW36 1801 aa11.78□□□□□ -0.52
SMAD3-211ENST00000559460 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-211ENST00000559460 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 SHMT1P34896 483 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 RFC2P35250 354 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 ICA1Q05084 483 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 PKN1Q16512 942 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 CCDC158Q5M9N0 1113 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 MAMDC4Q6UXC1 1216 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 TMEM179Q6ZVK1 233 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 SLC43A3Q8NBI5 491 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 IRF2BPLQ9H1B7 796 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 PRKAG3Q9UGI9 489 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 MTUS1Q9ULD2 1270 aa11.77□□□□□ -0.53
SMAD3-211ENST00000559460 COL4A4P53420 1690 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-211ENST00000559460 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 LPXNO60711 386 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 ERMP1Q7Z2K6 904 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-211ENST00000559460 TLK2Q86UE8 772 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
SMAD3-211ENST00000559460 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 PRSS33Q8NF86 280 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 POP1Q99575 1024 aaKnown RBP11.76□□□□□ -0.53
SMAD3-211ENST00000559460 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
SMAD3-211ENST00000559460 CHD7Q9P2D1 2997 aa11.75□□□□□ -0.53
SMAD3-211ENST00000559460 VWA5AO00534 786 aa11.75□□□□□ -0.53
SMAD3-211ENST00000559460 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
SMAD3-211ENST00000559460 BAIAP3O94812 1187 aa11.75□□□□□ -0.53
SMAD3-211ENST00000559460 FSCN1Q16658 493 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms