RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 DDIT3P35638 169 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 LRRC41Q15345 812 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 SHHQ15465 462 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 TRIM60Q495X7 471 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 C9orf50Q5SZB4 431 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 C1orf53Q5VUE5 145 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 FAM109BQ6ICB4 259 aaPredicted RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 CLEC17AQ6ZS10 378 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 NCAPG2Q86XI2 1143 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 RIOX2Q8IUF8 465 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 MB21D1Q8N884 522 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 TRIM43Q96BQ3 446 aaPredicted RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 LENG1Q96BZ8 264 aaPredicted RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 STRBPQ96SI9 672 aaKnown RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 NUP88Q99567 741 aaPredicted RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 SLKQ9H2G2 1235 aaPredicted RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 ARHGEF10LQ9HCE6 1279 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 EPB41L4AQ9HCS5 686 aaPredicted RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 PDLIM7Q9NR12 457 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 RIPK3Q9Y572 518 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 PCDHB15Q9Y5E8 787 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 SLC4A4Q9Y6R1 1079 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 MYH4Q9Y623 1939 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 ROBO3Q96MS0 1386 aa6.96□□□□□ -1.29
USP3-212ENST00000559276 DNAJC25-GNG10A0A024R161 153 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 ADCY6O43306 1168 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 SEC24BO95487 1268 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 SNAI1O95863 264 aaPredicted RBP6.96□□□□□ -1.3
USP3-212ENST00000559276 FCER1AP12319 257 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.3
USP3-212ENST00000559276 ADCYAP1R1P41586 468 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 EPHB4P54760 987 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 IRX5P78411 483 aaPredicted RBP6.96□□□□□ -1.3
USP3-212ENST00000559276 PLS1Q14651 629 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 SBK1Q52WX2 424 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 FAM83BQ5T0W9 1011 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 TSHZ3Q63HK5 1081 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 ARRDC4Q8NCT1 418 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 BADQ92934 168 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 FGD4Q96M96 766 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.31e-6■■■■□ 21.2
USP3-212ENST00000559276 KANSL2Q9H9L4 492 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 PHF24Q9UPV7 400 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 ATP11BQ9Y2G3 1177 aa6.96□□□□□ -1.3
USP3-212ENST00000559276 CHD9Q3L8U1 2897 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 F5H6K3 240 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 M0R2C6 588 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 FOXP2O15409 715 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 ADAMTS4O75173 837 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 SLC25A27O95847 323 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 NDUFB10O96000 172 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 PGK1P00558 417 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 TPM2P07951 284 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 STAT3P40763 770 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 TERF1P54274 439 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 TLE2Q04725 743 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 KLRC3Q07444 240 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 BMP2KLQ5H9B9 411 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 CCSAPQ6IQ19 270 aaPredicted RBP6.95□□□□□ -1.3
USP3-212ENST00000559276 SAMD1Q6SPF0 538 aaPredicted RBP6.95□□□□□ -1.3
USP3-212ENST00000559276 KBTBD3Q8NAB2 608 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 BBXQ8WY36 941 aaPredicted RBP6.95□□□□□ -1.3
USP3-212ENST00000559276 FERMT2Q96AC1 680 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 FAM161BQ96MY7 647 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 MMP19Q99542 508 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 LRRCC1Q9C099 1032 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 TTYH1Q9H313 450 aaPredicted RBP6.95□□□□□ -1.3
USP3-212ENST00000559276 DCTPP1Q9H773 170 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 ECHDC1Q9NTX5 307 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 NYAP2Q9P242 653 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 ARPP21Q9UBL0 812 aaPredicted RBP6.95□□□□□ -1.3
USP3-212ENST00000559276 NRBP1Q9UHY1 535 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 DIS3Q9Y2L1 958 aaKnown RBP6.95□□□□□ -1.3
USP3-212ENST00000559276 LCTP09848 1927 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 LRRC37A2A6NM11 1700 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 MCM3APO60318 1980 aa6.95□□□□□ -1.3
USP3-212ENST00000559276 A0A1W2PQ45 241 aaPredicted RBP6.94□□□□□ -1.3
USP3-212ENST00000559276 A0A1W2PQY0 241 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 MYADML2A6NDP7 307 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 KBTBD13C9JR72 458 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 GOLGA6L22H0YM25 854 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 ATP2A1O14983 1001 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 HS1BP3Q53T59 392 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 GIMAP6Q6P9H5 292 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 MAMDC4Q6UXC1 1216 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP3-212ENST00000559276 STK11IPQ8N1F8 1099 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 KLHDC9Q8NEP7 349 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 OTUD7AQ8TE49 926 aaPredicted RBP6.94□□□□□ -1.3
USP3-212ENST00000559276 APPBP2Q92624 585 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 MKL1Q969V6 931 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 SEC62Q99442 399 aaKnown RBP6.94□□□□□ -1.3
USP3-212ENST00000559276 LBHD1Q9BQE6 289 aaPredicted RBP6.94□□□□□ -1.3
USP3-212ENST00000559276 COL25A1Q9BXS0 654 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms