RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 TMTC2Q8N394 836 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 CCDC82Q8N4S0 544 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 CTCFLQ8NI51 663 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-208ENST00000558970 IL17RAQ96F46 866 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 PARK7Q99497 189 aaKnown RBP14.5□□□□□ -0.09
GABPB1-208ENST00000558970 R3HDMLQ9H3Y0 253 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 VAT1LQ9HCJ6 419 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 CPA4Q9UI42 421 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 SPDYE16A6NNV3 312 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-208ENST00000558970 LARGE1O95461 756 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 SNHG28P0DPA3 235 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 METAP2P50579 478 aaKnown RBP eCLIP14.49□□□□□ -0.09
GABPB1-208ENST00000558970 HERVK_113P62684 666 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 PLS1Q14651 629 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-208ENST00000558970 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 SLF1Q9BQI6 1058 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 AGXT2Q9BYV1 514 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 ZFYVE28Q9HCC9 887 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 NCOA5Q9HCD5 579 aaKnown RBP14.49□□□□□ -0.09
GABPB1-208ENST00000558970 MAD2L2Q9UI95 211 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 FEM1BQ9UK73 627 aa14.49□□□□□ -0.09
GABPB1-208ENST00000558970 PLXNB2O15031 1838 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 SMCHD1A6NHR9 2005 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 KLRF2D3W0D1 207 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 PLEKHA8P1O95397 391 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 CD2BP2O95400 341 aaKnown RBP14.48□□□□□ -0.09
GABPB1-208ENST00000558970 CALM1P0DP23 149 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 CALM2P0DP24 149 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 CALM3P0DP25 149 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 TAL1P17542 331 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-208ENST00000558970 HOXA7P31268 230 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-208ENST00000558970 COG2Q14746 738 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 RTN1Q16799 776 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 ASPRV1Q53RT3 343 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 CCDC174Q6PII3 467 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 PPP1R9AQ9ULJ8 1098 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 TPCN1Q9ULQ1 816 aa14.48□□□□□ -0.09
GABPB1-208ENST00000558970 CTDP1Q9Y5B0 961 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-208ENST00000558970 RBBP6Q7Z6E9 1792 aaKnown RBP14.47□□□□□ -0.09
GABPB1-208ENST00000558970 CCDC85CA6NKD9 419 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 ST18O60284 1047 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 ALDH1A1P00352 501 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 PDIA3P30101 505 aaKnown RBP14.47□□□□□ -0.09
GABPB1-208ENST00000558970 CDC27P30260 824 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 DSG3P32926 999 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 GPATCH4Q5T3I0 446 aaKnown RBP14.47□□□□□ -0.09
GABPB1-208ENST00000558970 SYDE2Q5VT97 1194 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 NBPF11Q86T75 865 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 HOMER1Q86YM7 354 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 CPXCR1Q8N123 301 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 NECAB1Q8N987 351 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 FANCBQ8NB91 859 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 CHURC1Q8WUH1 139 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 PRR12Q9ULL5 1215 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 HPS5Q9UPZ3 1129 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 SLC45A1Q9Y2W3 748 aa14.47□□□□□ -0.09
GABPB1-208ENST00000558970 hCG_1642624A0A1W2PR95 340 aa14.46□□□□□ -0.09
GABPB1-208ENST00000558970 PALM3A6NDB9 673 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-208ENST00000558970 KIF5BP33176 963 aa14.46□□□□□ -0.09
GABPB1-208ENST00000558970 ADD1P35611 737 aaKnown RBP14.46□□□□□ -0.09
GABPB1-208ENST00000558970 ANKRD1Q15327 319 aa14.46□□□□□ -0.09
GABPB1-208ENST00000558970 POTEEQ6S8J3 1075 aa14.46□□□□□ -0.09
GABPB1-208ENST00000558970 FAM160B2Q86V87 743 aa14.46□□□□□ -0.09
GABPB1-208ENST00000558970 PRPF38AQ8NAV1 312 aaKnown RBP14.46□□□□□ -0.09
GABPB1-208ENST00000558970 TXNRD2Q9NNW7 524 aa14.46□□□□□ -0.09
GABPB1-208ENST00000558970 ZCCHC17Q9NP64 241 aaKnown RBP14.46□□□□□ -0.09
GABPB1-208ENST00000558970 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
GABPB1-208ENST00000558970 ADGRA2Q96PE1 1338 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 VWA5AO00534 786 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 TLR2O60603 784 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 ME3Q16798 604 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 WDR78Q5VTH9 848 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 ADGRF4Q8IZF3 695 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 FBXL16Q8N461 479 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 ALDH8A1Q9H2A2 487 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-208ENST00000558970 SLKQ9H2G2 1235 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-208ENST00000558970 RAVER2Q9HCJ3 691 aaKnown RBP14.45□□□□□ -0.1
GABPB1-208ENST00000558970 HOMER2Q9NSB8 354 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 HOXC10Q9NYD6 342 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 PCDH10Q9P2E7 1040 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 CASP8AP2Q9UKL3 1982 aa14.45□□□□□ -0.1
GABPB1-208ENST00000558970 ZBED4O75132 1171 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 CNMDO75829 334 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 SCRN1Q12765 414 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 TMEM132BQ14DG7 1078 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 CDC37Q16543 378 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-208ENST00000558970 SLC35G1Q2M3R5 365 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 USH1GQ495M9 461 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 TMTC3Q6ZXV5 915 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 SRBD1Q8N5C6 995 aaKnown RBP14.44□□□□□ -0.1
GABPB1-208ENST00000558970 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-208ENST00000558970 PIGSQ96S52 555 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 JMJD4Q9H9V9 463 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 RBM28Q9NW13 759 aaKnown RBP14.44□□□□□ -0.1
GABPB1-208ENST00000558970 RBPJLQ9UBG7 517 aa14.44□□□□□ -0.1
GABPB1-208ENST00000558970 ZNFX1Q9P2E3 1918 aaKnown RBP14.44□□□□□ -0.1
GABPB1-208ENST00000558970 CPLX1O14810 134 aa14.43□□□□□ -0.1
GABPB1-208ENST00000558970 CYTH3O43739 400 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms