RNA–Protein interactions for RNA: ENST00000558933.5

IDH3A-210, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 3

Gene IDH3A, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-210ENST00000558933 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
IDH3A-210ENST00000558933 CNPY2Q9Y2B0 182 aa16.28■□□□□ 0.2
IDH3A-210ENST00000558933 TRIM6-TRIM34B2RNG4 842 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 IGHA2P01877 340 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 RARBP10826 455 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 BMP3P12645 472 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 BMP8BP34820 402 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 SLFN13Q68D06 897 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 FAM160B2Q86V87 743 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 REPS2Q8NFH8 660 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 TINF2Q9BSI4 451 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 LNPKQ9C0E8 428 aa16.27■□□□□ 0.2
IDH3A-210ENST00000558933 ZMYM6O95789 1325 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
IDH3A-210ENST00000558933 SLC1A4P43007 532 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 CPXCR1Q8N123 301 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 TRPV1Q8NER1 839 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 GMCL1Q96IK5 515 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 TOMM22Q9NS69 142 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
IDH3A-210ENST00000558933 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 RANBP6O60518 1105 aaKnown RBP16.25■□□□□ 0.19
IDH3A-210ENST00000558933 PGK2P07205 417 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
IDH3A-210ENST00000558933 AKR1A1P14550 325 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 SYN1P17600 705 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 LRRC26Q2I0M4 334 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 ZNF792Q3KQV3 632 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 RNF180Q86T96 592 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 SMC5Q8IY18 1101 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 CHST13Q8NET6 341 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 GDF15Q99988 308 aa16.25■□□□□ 0.19
IDH3A-210ENST00000558933 LBHD1Q9BQE6 289 aaPredicted RBP16.25■□□□□ 0.19
IDH3A-210ENST00000558933 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
IDH3A-210ENST00000558933 CCDC171Q6TFL3 1326 aa16.24■□□□□ 0.19
IDH3A-210ENST00000558933 ORC4O43929 436 aa16.24■□□□□ 0.19
IDH3A-210ENST00000558933 MAGEA10P43363 369 aaPredicted RBP16.24■□□□□ 0.19
IDH3A-210ENST00000558933 ALX1Q15699 326 aa16.24■□□□□ 0.19
IDH3A-210ENST00000558933 GJC2Q5T442 439 aaPredicted RBP16.24■□□□□ 0.19
IDH3A-210ENST00000558933 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
IDH3A-210ENST00000558933 RILPL2Q969X0 211 aa16.24■□□□□ 0.19
IDH3A-210ENST00000558933 UBE2OQ9C0C9 1292 aaKnown RBP16.24■□□□□ 0.19
IDH3A-210ENST00000558933 XPNPEP3Q9NQH7 507 aa16.24■□□□□ 0.19
IDH3A-210ENST00000558933 TMEM232C9JQI7 657 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 HIP1O00291 1037 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 NT5C2P49902 561 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 TKFCQ3LXA3 575 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 ANO1Q5XXA6 986 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 B4GALNT3Q6L9W6 998 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.23■□□□□ 0.19
IDH3A-210ENST00000558933 CHD1LQ86WJ1 897 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 ACAD9Q9H845 621 aa16.23■□□□□ 0.19
IDH3A-210ENST00000558933 RAVER2Q9HCJ3 691 aaKnown RBP16.23■□□□□ 0.19
IDH3A-210ENST00000558933 RANBP2P49792 3224 aaKnown RBP16.23■□□□□ 0.19
IDH3A-210ENST00000558933 A0A0D9SFI3 127 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 PLA2G6O60733 806 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
IDH3A-210ENST00000558933 RTP1P59025 263 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 VPS53Q5VIR6 699 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 STAG1Q8WVM7 1258 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 FAM227BQ96M60 508 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 RNF41Q9H4P4 317 aaPredicted RBP16.22■□□□□ 0.19
IDH3A-210ENST00000558933 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 LTBP2Q14767 1821 aa16.22■□□□□ 0.19
IDH3A-210ENST00000558933 FOXP2O15409 715 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 NMIQ13287 307 aaPredicted RBP16.21■□□□□ 0.19
IDH3A-210ENST00000558933 LRRC41Q15345 812 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 RRP12Q5JTH9 1297 aaKnown RBP16.21■□□□□ 0.19
IDH3A-210ENST00000558933 PRAMEF19Q5SWL8 479 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 MAMDC4Q6UXC1 1216 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 SPC25Q9HBM1 224 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 ZHX1Q9UKY1 873 aaPredicted RBP16.21■□□□□ 0.19
IDH3A-210ENST00000558933 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 ATP11BQ9Y2G3 1177 aa16.21■□□□□ 0.19
IDH3A-210ENST00000558933 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.18
IDH3A-210ENST00000558933 MCM3APO60318 1980 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 DNAJC25-GNG10A0A024R161 153 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 FGAP02671 866 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 HSPD1P10809 573 aaKnown RBP16.2■□□□□ 0.18
IDH3A-210ENST00000558933 MCCP23508 829 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 NUCB1Q02818 461 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 OSBPL3Q9H4L5 887 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 HOMER2Q9NSB8 354 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 PNMA2Q9UL42 364 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 RIPK3Q9Y572 518 aa16.2■□□□□ 0.18
IDH3A-210ENST00000558933 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms