RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 PRKAG2Q9UGJ0 569 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 FEM1BQ9UK73 627 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 DIS3Q9Y2L1 958 aaKnown RBP17.39■□□□□ 0.37
SHMT2-235ENST00000557740 RARBP10826 455 aa17.38■□□□□ 0.37
SHMT2-235ENST00000557740 RTP1P59025 263 aa17.38■□□□□ 0.37
SHMT2-235ENST00000557740 TFAP4Q01664 338 aa17.38■□□□□ 0.37
SHMT2-235ENST00000557740 TDHQ8IZJ6 230 aa17.38■□□□□ 0.37
SHMT2-235ENST00000557740 DDX11Q96FC9 970 aa17.38■□□□□ 0.37
SHMT2-235ENST00000557740 CNPY2Q9Y2B0 182 aa17.38■□□□□ 0.37
SHMT2-235ENST00000557740 ATP2A1O14983 1001 aa17.37■□□□□ 0.37
SHMT2-235ENST00000557740 PDE1AP54750 535 aa17.37■□□□□ 0.37
SHMT2-235ENST00000557740 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-235ENST00000557740 LRRC41Q15345 812 aa17.37■□□□□ 0.37
SHMT2-235ENST00000557740 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
SHMT2-235ENST00000557740 LRCH3Q96II8 777 aa17.37■□□□□ 0.37
SHMT2-235ENST00000557740 LBHD1Q9BQE6 289 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-235ENST00000557740 RAVER2Q9HCJ3 691 aaKnown RBP17.37■□□□□ 0.37
SHMT2-235ENST00000557740 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
SHMT2-235ENST00000557740 ATP11BQ9Y2G3 1177 aa17.37■□□□□ 0.37
SHMT2-235ENST00000557740 COL11A1P12107 1806 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-235ENST00000557740 TSPY2A6NKD2 308 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 BMP3P12645 472 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 CTDSPL2Q05D32 466 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 IKQ13123 557 aaPredicted RBP17.36■□□□□ 0.37
SHMT2-235ENST00000557740 SLC38A10Q9HBR0 1119 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 FBXO40Q9UH90 709 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 STX8Q9UNK0 236 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 RIPK3Q9Y572 518 aa17.36■□□□□ 0.37
SHMT2-235ENST00000557740 TMEM232C9JQI7 657 aa17.35■□□□□ 0.37
SHMT2-235ENST00000557740 FOXP2O15409 715 aa17.35■□□□□ 0.37
SHMT2-235ENST00000557740 AKR1A1P14550 325 aa17.35■□□□□ 0.37
SHMT2-235ENST00000557740 TAL1P17542 331 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-235ENST00000557740 SLC1A4P43007 532 aa17.35■□□□□ 0.37
SHMT2-235ENST00000557740 STAT2P52630 851 aa17.35■□□□□ 0.37
SHMT2-235ENST00000557740 OAZ1P54368 228 aa17.35■□□□□ 0.37
SHMT2-235ENST00000557740 AAMPQ13685 434 aa17.35■□□□□ 0.37
SHMT2-235ENST00000557740 MSL3Q8N5Y2 521 aaKnown RBP17.35■□□□□ 0.37
SHMT2-235ENST00000557740 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHMT2-235ENST00000557740 RANBP6O60518 1105 aaKnown RBP17.34■□□□□ 0.37
SHMT2-235ENST00000557740 FDX1P10109 184 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 ADCYAP1R1P41586 468 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 LRIT3Q3SXY7 679 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 VPS53Q5VIR6 699 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 SLC39A5Q6ZMH5 540 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 RNF180Q86T96 592 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 FAM160B2Q86V87 743 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 CHST13Q8NET6 341 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 FERMT2Q96AC1 680 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 GMCL1Q96IK5 515 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 SYNGAP1Q96PV0 1343 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
SHMT2-235ENST00000557740 ZHX1Q9UKY1 873 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-235ENST00000557740 MYH4Q9Y623 1939 aa17.33■□□□□ 0.37
SHMT2-235ENST00000557740 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 PGK1P00558 417 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 ZNF865P0CJ78 1059 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-235ENST00000557740 TRIM60Q495X7 471 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.36
SHMT2-235ENST00000557740 CHURC1Q8WUH1 139 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 LENG1Q96BZ8 264 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-235ENST00000557740 CHMP4CQ96CF2 233 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 LNPKQ9C0E8 428 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 PRDM5Q9NQX1 630 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-235ENST00000557740 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 ANAPC4Q9UJX5 808 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 PHF24Q9UPV7 400 aa17.33■□□□□ 0.36
SHMT2-235ENST00000557740 A0A0D9SFI3 127 aa17.32■□□□□ 0.36
SHMT2-235ENST00000557740 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
SHMT2-235ENST00000557740 MCCP23508 829 aa17.32■□□□□ 0.36
SHMT2-235ENST00000557740 MCMDC2Q4G0Z9 681 aa17.32■□□□□ 0.36
SHMT2-235ENST00000557740 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
SHMT2-235ENST00000557740 TICAM2Q86XR7 235 aa17.32■□□□□ 0.36
SHMT2-235ENST00000557740 FAM227BQ96M60 508 aa17.32■□□□□ 0.36
SHMT2-235ENST00000557740 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
SHMT2-235ENST00000557740 FAM184BQ9ULE4 1060 aa17.32■□□□□ 0.36
SHMT2-235ENST00000557740 SZT2Q5T011 3432 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 LAMA3Q16787 3333 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 ORC4O43929 436 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 NMT2O60551 498 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 SNX17Q15036 470 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 ALX1Q15699 326 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 GPR153Q6NV75 609 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 MAMDC4Q6UXC1 1216 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 KCTD1Q719H9 257 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 STAG1Q8WVM7 1258 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 ACAD9Q9H845 621 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 INCENPQ9NQS7 918 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 MTMR7Q9Y216 660 aa17.31■□□□□ 0.36
SHMT2-235ENST00000557740 SNAI1O95863 264 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-235ENST00000557740 NMIQ13287 307 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-235ENST00000557740 CCDC96Q2M329 555 aa17.3■□□□□ 0.36
SHMT2-235ENST00000557740 RRP12Q5JTH9 1297 aaKnown RBP17.3■□□□□ 0.36
SHMT2-235ENST00000557740 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
SHMT2-235ENST00000557740 PDLIM7Q9NR12 457 aa17.3■□□□□ 0.36
SHMT2-235ENST00000557740 IL17RBQ9NRM6 502 aa17.3■□□□□ 0.36
SHMT2-235ENST00000557740 RNF146Q9NTX7 359 aa17.3■□□□□ 0.36
SHMT2-235ENST00000557740 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-235ENST00000557740 ZNFX1Q9P2E3 1918 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms