RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PARD6BQ9BYG5 372 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 MAD2L2Q9UI95 211 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 TFR2Q9UP52 801 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 LAMB1P07942 1786 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 ERICH4A6NGS2 130 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 POLR3GO15318 223 aaPredicted RBP20.01■□□□□ 0.79
XRCC3-218ENST00000557439 ZPR1O75312 459 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 KIF5BP33176 963 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 SBK1Q52WX2 424 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 RSRC2Q7L4I2 434 aaKnown RBP20■□□□□ 0.79
XRCC3-218ENST00000557439 CTAGE1Q96RT6 745 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 CHP1Q99653 195 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 NARFQ9UHQ1 456 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 PCDHA4Q9UN74 947 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 PIP4K2BP78356 416 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 TCP11X2Q5H9J9 407 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 ZNF658Q5TYW1 1059 aaPredicted RBP20■□□□□ 0.79
XRCC3-218ENST00000557439 IRF2BP1Q8IU81 584 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 SLC35F6Q8N357 371 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 SLF1Q9BQI6 1058 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 ZCCHC17Q9NP64 241 aaKnown RBP20■□□□□ 0.79
XRCC3-218ENST00000557439 ARGLU1Q9NWB6 273 aaPredicted RBP20■□□□□ 0.79
XRCC3-218ENST00000557439 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
XRCC3-218ENST00000557439 RWDD2AQ9UIY3 292 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 PCDHA6Q9UN73 950 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 PCDHA8Q9Y5H6 950 aa20■□□□□ 0.79
XRCC3-218ENST00000557439 CCDC194A0A1B0GVG4 234 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 ABHD10Q9NUJ1 306 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 TRIM10Q9UDY6 481 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 LDHBP07195 334 aaKnown RBP19.99■□□□□ 0.79
XRCC3-218ENST00000557439 TSPY3P0CV98 308 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 TSPY8P0CW00 308 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 UBXN1Q04323 297 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 ANKRD2Q9GZV1 360 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 DISC1Q9NRI5 854 aa19.99■□□□□ 0.79
XRCC3-218ENST00000557439 LIMA1Q9UHB6 759 aaKnown RBP19.99■□□□□ 0.79
XRCC3-218ENST00000557439 GOLGB1Q14789 3259 aaKnown RBP19.99■□□□□ 0.79
XRCC3-218ENST00000557439 TBC1D8O95759 1140 aa19.98■□□□□ 0.79
XRCC3-218ENST00000557439 TRAPPC10P48553 1259 aa19.98■□□□□ 0.79
XRCC3-218ENST00000557439 CC2D1AQ6P1N0 951 aaPredicted RBP19.98■□□□□ 0.79
XRCC3-218ENST00000557439 KRT9P35527 623 aa19.98■□□□□ 0.79
XRCC3-218ENST00000557439 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
XRCC3-218ENST00000557439 ARHGEF1Q92888 912 aaKnown RBP19.98■□□□□ 0.79
XRCC3-218ENST00000557439 IRS2Q9Y4H2 1338 aa19.98■□□□□ 0.79
XRCC3-218ENST00000557439 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
XRCC3-218ENST00000557439 CCDC88AQ3V6T2 1871 aa19.98■□□□□ 0.79
XRCC3-218ENST00000557439 NKRFO15226 690 aaKnown RBP eCLIP19.97■□□□□ 0.79
XRCC3-218ENST00000557439 KIF5CO60282 957 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 DTHD1Q6ZMT9 781 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 BARGINQ6ZT62 677 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 CNGA4Q8IV77 575 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 TMEM47Q9BQJ4 181 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 NYXQ9GZU5 481 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 VAT1LQ9HCJ6 419 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 M0R2N6 131 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 KIF20AO95235 890 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 CALML3P27482 149 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
XRCC3-218ENST00000557439 PARP1P09874 1014 aaKnown RBP19.96■□□□□ 0.79
XRCC3-218ENST00000557439 LONP1P36776 959 aaKnown RBP19.96■□□□□ 0.79
XRCC3-218ENST00000557439 GRM4Q14833 912 aa19.96■□□□□ 0.79
XRCC3-218ENST00000557439 CT47A1Q5JQC4 288 aaPredicted RBP19.96■□□□□ 0.79
XRCC3-218ENST00000557439 STXBP3O00186 592 aa19.96■□□□□ 0.79
XRCC3-218ENST00000557439 TXLNAP40222 546 aa19.96■□□□□ 0.79
XRCC3-218ENST00000557439 DGKHQ86XP1 1220 aa19.96■□□□□ 0.79
XRCC3-218ENST00000557439 GPR161Q8N6U8 529 aaKnown RBP19.96■□□□□ 0.79
XRCC3-218ENST00000557439 HPS3Q969F9 1004 aa19.96■□□□□ 0.79
XRCC3-218ENST00000557439 NAA15Q9BXJ9 866 aaKnown RBP19.96■□□□□ 0.79
XRCC3-218ENST00000557439 CNTNAP4Q9C0A0 1308 aa19.96■□□□□ 0.79
XRCC3-218ENST00000557439 LRRC10BA6NIK2 292 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 RPS6KA4O75676 772 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 CHMP4BP1P59074 171 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 ARL6IP4Q66PJ3 421 aaKnown RBP19.95■□□□□ 0.78
XRCC3-218ENST00000557439 USP17L2Q6R6M4 530 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 GOLGA1Q92805 767 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 C8orf37Q96NL8 207 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 TTC26A0AVF1 554 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 KLRC4O43908 158 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 UBA7P41226 1012 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 ARHGAP25P42331 645 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 KLK7P49862 253 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 GPIHBP1Q8IV16 184 aa19.95■□□□□ 0.78
XRCC3-218ENST00000557439 ZNF444Q8N0Y2 327 aaPredicted RBP19.95■□□□□ 0.78
XRCC3-218ENST00000557439 TNRC6CQ9HCJ0 1690 aaKnown RBP19.95■□□□□ 0.78
XRCC3-218ENST00000557439 TPM1P09493 284 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 LETM2Q2VYF4 491 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 ADSSL1Q8N142 457 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 EP400Q96L91 3159 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 ITIH6Q6UXX5 1313 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 RASA1P20936 1047 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 GYS2P54840 703 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 PNKPQ96T60 521 aa19.94■□□□□ 0.78
XRCC3-218ENST00000557439 CCNL1Q9UK58 526 aaPredicted RBP19.94■□□□□ 0.78
XRCC3-218ENST00000557439 REXO2Q9Y3B8 237 aaKnown RBP19.94■□□□□ 0.78
XRCC3-218ENST00000557439 KLRF2D3W0D1 207 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 TRIM47Q96LD4 638 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 SUGCTQ9HAC7 445 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 PDS5AQ29RF7 1337 aaKnown RBP19.93■□□□□ 0.78
XRCC3-218ENST00000557439 RHOXF2BP0C7M4 288 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 PLCG1P19174 1290 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms