RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 USP17L21D6R901 530 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 OR52Z1P0C646 297 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 XKR9Q5GH70 373 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 PKD2L1Q9P0L9 805 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 KDM2BQ8NHM5 1336 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 TAF5LO75529 589 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 SCG2P13521 617 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 MAN1A1P33908 653 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 PLCB1Q9NQ66 1216 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 UTP11Q9Y3A2 253 aaKnown RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 BZW2Q9Y6E2 419 aaKnown RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 ZMYM6O95789 1325 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 ASNSP08243 561 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 GABPAQ06546 454 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 PPP2R3CQ969Q6 453 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 TRMT1Q9NXH9 659 aaKnown RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
NEK9-210ENST00000557026 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
NEK9-210ENST00000557026 CCDC122Q5T0U0 273 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 SFMBT2Q5VUG0 894 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 RUFY4Q6ZNE9 571 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 TCP11Q8WWU5 503 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 TMEM206Q9H813 350 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 GOLGA8QA0A0J9YX86 632 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 GOLGA8OA6NCC3 632 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 GOLGA8NF8WBI6 632 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 ORC2Q13416 577 aaPredicted RBP13.19□□□□□ -0.3
NEK9-210ENST00000557026 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 MED10Q9BTT4 135 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
NEK9-210ENST00000557026 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 KRT19P08727 400 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 STAT1P42224 750 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 NLRP12P59046 1061 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 PODNQ7Z5L7 613 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 TRIM50Q86XT4 487 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 CAPN9O14815 690 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 LMNB2Q03252 620 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 EFCAB13Q8IY85 973 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 NDUFAF2Q8N183 169 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 ARHGAP24Q8N264 748 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 C16orf45Q96MC5 204 aaPredicted RBP13.19□□□□□ -0.3
NEK9-210ENST00000557026 BAG1Q99933 345 aaPredicted RBP13.19□□□□□ -0.3
NEK9-210ENST00000557026 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
NEK9-210ENST00000557026 USH1GQ495M9 461 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 FANCBQ8NB91 859 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 COA7Q96BR5 231 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
NEK9-210ENST00000557026 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 SAMD15Q9P1V8 674 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 HEG1Q9ULI3 1381 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 NOL3O60936 208 aaKnown RBP13.18□□□□□ -0.3
NEK9-210ENST00000557026 ZWINTO95229 277 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 FBLN1P23142 703 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
NEK9-210ENST00000557026 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 ABCC4O15439 1325 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 GBP6Q6ZN66 633 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 KIAA0825Q8IV33 1275 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 RAB17Q9H0T7 212 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 DNAJC25Q9H1X3 360 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 NUB1Q9Y5A7 615 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.18□□□□□ -0.3
NEK9-210ENST00000557026 PRPSAP1Q14558 356 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 CCDC6Q16204 474 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 IFT20Q8IY31 132 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 METTL13Q8N6R0 699 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 ANKRD36BP1Q96IX9 119 aa13.18□□□□□ -0.3
NEK9-210ENST00000557026 TPH2Q8IWU9 490 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 CTNND2Q9UQB3 1225 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 CDC42BPGQ6DT37 1551 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 ERBB3P21860 1342 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 E7EWF7 191 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 FAM178BQ8IXR5 827 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 IGSF22Q8N9C0 903 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.3
NEK9-210ENST00000557026 HMGB3O15347 200 aaKnown RBP13.17□□□□□ -0.3
NEK9-210ENST00000557026 BMP3P12645 472 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 PHBP35232 272 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 KYAT1Q16773 422 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 TTC16Q8NEE8 873 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms