RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 MAP4K1Q92918 833 aa12.65□□□□□ -0.38
IFT43-212ENST00000556742 APBA2Q99767 749 aa12.65□□□□□ -0.38
IFT43-212ENST00000556742 KDM4AO75164 1064 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 GJB1P08034 283 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 CCL5P13501 91 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 CYP2B6P20813 491 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 STAT3P40763 770 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 OAZ1P54368 228 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 PTH1RQ03431 593 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 PLS1Q14651 629 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 MTFR1Q15390 333 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 WDR78Q5VTH9 848 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 TRIB2Q92519 343 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 TEX13BQ9BXU2 312 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
IFT43-212ENST00000556742 MCM3APO60318 1980 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 B4E1Z4 1266 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 ZBED4O75132 1171 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 CYP21A2P08686 494 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 ZKSCAN1P17029 563 aaPredicted RBP12.63□□□□□ -0.39
IFT43-212ENST00000556742 MCCP23508 829 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 GJA8P48165 433 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 MAP3K21Q5TCX8 1036 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
IFT43-212ENST00000556742 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
IFT43-212ENST00000556742 NCAPG2Q86XI2 1143 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 ESYT1Q9BSJ8 1104 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 RNF208Q9H0X6 261 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 PAK6Q9NQU5 681 aaPredicted RBP12.63□□□□□ -0.39
IFT43-212ENST00000556742 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
IFT43-212ENST00000556742 RPTORQ8N122 1335 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 FCER1AP12319 257 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 ADORA2AP29274 412 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 TRDNQ13061 729 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 SNRNP48Q6IEG0 339 aaKnown RBP12.62□□□□□ -0.39
IFT43-212ENST00000556742 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 SKAP1Q86WV1 359 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 ZSCAN10Q96SZ4 725 aaPredicted RBP12.62□□□□□ -0.39
IFT43-212ENST00000556742 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 CTDP1Q9Y5B0 961 aaPredicted RBP12.62□□□□□ -0.39
IFT43-212ENST00000556742 LCTP09848 1927 aa12.62□□□□□ -0.39
IFT43-212ENST00000556742 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
IFT43-212ENST00000556742 IGHA2P01877 340 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 PDHBP11177 359 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 EN2P19622 333 aaPredicted RBP12.61□□□□□ -0.39
IFT43-212ENST00000556742 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
IFT43-212ENST00000556742 OLFML2BQ68BL8 750 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 CASC1Q6TDU7 716 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 KCTD1Q719H9 257 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 DPP9Q86TI2 863 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 ENAHQ8N8S7 591 aaPredicted RBP12.61□□□□□ -0.39
IFT43-212ENST00000556742 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
IFT43-212ENST00000556742 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.39
IFT43-212ENST00000556742 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
IFT43-212ENST00000556742 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 PRR12Q9ULL5 1215 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
IFT43-212ENST00000556742 TNKSO95271 1327 aa12.61□□□□□ -0.39
IFT43-212ENST00000556742 CEP290O15078 2479 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 E7EWF7 191 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 CDC45O75419 566 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 SGPL1O95470 568 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 ZNF543Q08ER8 600 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 KCTD2Q14681 263 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 CCL14Q16627 93 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 GPATCH4Q5T3I0 446 aaKnown RBP12.6□□□□□ -0.39
IFT43-212ENST00000556742 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 CHST13Q8NET6 341 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 NCOA7Q8NI08 942 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 U2AF1L4Q8WU68 220 aaKnown RBP12.6□□□□□ -0.39
IFT43-212ENST00000556742 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 MMP19Q99542 508 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 UBAC1Q9BSL1 405 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 KAT14Q9H8E8 782 aa12.6□□□□□ -0.39
IFT43-212ENST00000556742 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
IFT43-212ENST00000556742 DIS3Q9Y2L1 958 aaKnown RBP12.6□□□□□ -0.39
IFT43-212ENST00000556742 ALPK3Q96L96 1907 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
IFT43-212ENST00000556742 CACNB2Q08289 660 aaPredicted RBP12.59□□□□□ -0.39
IFT43-212ENST00000556742 TRIM32Q13049 653 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 SEC23AQ15436 765 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 TKFCQ3LXA3 575 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 RALYLQ86SE5 291 aaKnown RBP12.59□□□□□ -0.39
IFT43-212ENST00000556742 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 CRISPLD2Q9H0B8 497 aa12.59□□□□□ -0.39
IFT43-212ENST00000556742 RANBP17Q9H2T7 1088 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms