RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 IQCA1Q86XH1 822 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 NCAPG2Q86XI2 1143 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 ABRAQ8N0Z2 381 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 DCAF4Q8WV16 495 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 TTC14Q96N46 770 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 TEX13BQ9BXU2 312 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 KRT23Q9C075 422 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 SLC38A10Q9HBR0 1119 aa13.58□□□□□ -0.24
SLIRP-206ENST00000556375 ISY1Q9ULR0 285 aaKnown RBP13.58□□□□□ -0.24
SLIRP-206ENST00000556375 B4E1Z4 1266 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 ZBED4O75132 1171 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 FDX1P10109 184 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 ADORA2AP29274 412 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 GJA8P48165 433 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 OAZ1P54368 228 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 CCDC96Q2M329 555 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 CCDC178Q5BJE1 867 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 SNRNP48Q6IEG0 339 aaKnown RBP13.57□□□□□ -0.24
SLIRP-206ENST00000556375 RASGRP2Q7LDG7 609 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 CHURC1Q8WUH1 139 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 ESYT1Q9BSJ8 1104 aa13.57□□□□□ -0.24
SLIRP-206ENST00000556375 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
SLIRP-206ENST00000556375 PAK6Q9NQU5 681 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-206ENST00000556375 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-206ENST00000556375 CYP21A2P08686 494 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 FCER1AP12319 257 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
SLIRP-206ENST00000556375 TRIM32Q13049 653 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-206ENST00000556375 CCL14Q16627 93 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 U2AF1L4Q8WU68 220 aaKnown RBP13.56□□□□□ -0.24
SLIRP-206ENST00000556375 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 RPTORQ8N122 1335 aa13.56□□□□□ -0.24
SLIRP-206ENST00000556375 PDHBP11177 359 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 CAPN2P17655 700 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 TRDNQ13061 729 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 KIAA1211Q6ZU35 1233 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 DPP9Q86TI2 863 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 NPLOC4Q8TAT6 608 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 CHMP4CQ96CF2 233 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
SLIRP-206ENST00000556375 MMP19Q99542 508 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 ZKSCAN3Q9BRR0 538 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
SLIRP-206ENST00000556375 SLC5A4Q9NY91 659 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
SLIRP-206ENST00000556375 TNKSO95271 1327 aa13.55□□□□□ -0.24
SLIRP-206ENST00000556375 COBLO75128 1261 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 CDC45O75419 566 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 SGPL1O95470 568 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 IGHA2P01877 340 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-206ENST00000556375 KCTD2Q14681 263 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 OLFML2BQ68BL8 750 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 BTNL9Q6UXG8 535 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.54□□□□□ -0.24
SLIRP-206ENST00000556375 CPXCR1Q8N123 301 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-206ENST00000556375 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 DEFB118Q96PH6 123 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 UBAC1Q9BSL1 405 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 LSG1Q9H089 658 aaKnown RBP13.54□□□□□ -0.24
SLIRP-206ENST00000556375 RAVER2Q9HCJ3 691 aaKnown RBP13.54□□□□□ -0.24
SLIRP-206ENST00000556375 FLRT1Q9NZU1 646 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 ZSWIM5Q9P217 1185 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 FBXO40Q9UH90 709 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
SLIRP-206ENST00000556375 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
SLIRP-206ENST00000556375 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 CHST13Q8NET6 341 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 KAT14Q9H8E8 782 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 ZNF536O15090 1300 aa13.53□□□□□ -0.24
SLIRP-206ENST00000556375 FRMPD2Q68DX3 1309 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-206ENST00000556375 MYH6P13533 1939 aa13.52□□□□□ -0.24
SLIRP-206ENST00000556375 E7EWF7 191 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 TKFCQ3LXA3 575 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.25
SLIRP-206ENST00000556375 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 TTBK2Q6IQ55 1244 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 MAML3Q96JK9 1138 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 RANBP17Q9H2T7 1088 aaKnown RBP13.52□□□□□ -0.25
SLIRP-206ENST00000556375 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms