RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 TFRCP02786 760 aaKnown RBP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 ZFYP08048 801 aaPredicted RBP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 GCLCP48506 637 aaPredicted RBP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 PABPC4Q13310 644 aaKnown RBP eCLIP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 TMED8Q6PL24 325 aaPredicted RBP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 GPR142Q7Z601 462 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 GPRC5AQ8NFJ5 357 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 NPLOC4Q8TAT6 608 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 KHSRPQ92945 711 aaKnown RBP eCLIP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 EVI5LQ96CN4 794 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 CEP95Q96GE4 821 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 MOV10L1Q9BXT6 1211 aaKnown RBP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 NAPBQ9H115 298 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 VCPKMTQ9H867 229 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 MKNK2Q9HBH9 465 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 GINM1Q9NU53 330 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 CLIP2Q9UDT6 1046 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 TMX2Q9Y320 296 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 TAF6LQ9Y6J9 622 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 DDX49Q9Y6V7 483 aaKnown RBP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 PLXNA1Q9UIW2 1896 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 CDH23Q9H251 3354 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 LCTP09848 1927 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 NEDD4P46934 1319 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 EVI5O60447 810 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 FLOT1O75955 427 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 SDSP20132 328 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 CCND3P30281 292 aaPredicted RBP7.6□□□□□ -1.19
TMEM260-209ENST00000556079 SLC4A3P48751 1232 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 USP14P54578 494 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 TFAP4Q01664 338 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 PLS1Q14651 629 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 TMEM132BQ14DG7 1078 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 VARS2Q5ST30 1063 aaKnown RBP7.6□□□□□ -1.19
TMEM260-209ENST00000556079 MORN1Q5T089 497 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 GPR153Q6NV75 609 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 CWC27Q6UX04 472 aaKnown RBP7.6□□□□□ -1.19
TMEM260-209ENST00000556079 PLEKHH3Q7Z736 793 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 AMOTL1Q8IY63 956 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 TRPV1Q8NER1 839 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 USP6NLQ92738 828 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 COA7Q96BR5 231 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 DDRGK1Q96HY6 314 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 PAWRQ96IZ0 340 aaKnown RBP7.6□□□□□ -1.19
TMEM260-209ENST00000556079 ARHGEF10LQ9HCE6 1279 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 IL17RBQ9NRM6 502 aa7.6□□□□□ -1.19
TMEM260-209ENST00000556079 CCDC171Q6TFL3 1326 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 RBAK-RBAKDNI3L0D1 243 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 COBLO75128 1261 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 FGAP02671 866 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 PGK2P07205 417 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 HSPD1P10809 573 aaKnown RBP7.59□□□□□ -1.19
TMEM260-209ENST00000556079 ERCC3P19447 782 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 CYP2C19P33261 490 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 COL9A3Q14050 684 aaPredicted RBP7.59□□□□□ -1.19
TMEM260-209ENST00000556079 RRP12Q5JTH9 1297 aaKnown RBP7.59□□□□□ -1.19
TMEM260-209ENST00000556079 ANO1Q5XXA6 986 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 GIMAP6Q6P9H5 292 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 LBX2Q6XYB7 198 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 REPS2Q8NFH8 660 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 CCDC17Q96LX7 622 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 ZKSCAN3Q9BRR0 538 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 SPATC1LQ9H0A9 340 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.59□□□□□ -1.19
TMEM260-209ENST00000556079 ZSWIM6Q9HCJ5 1215 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 PAK6Q9NQU5 681 aaPredicted RBP7.59□□□□□ -1.19
TMEM260-209ENST00000556079 HELLSQ9NRZ9 838 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 MTMR4Q9NYA4 1195 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 ZMYND8Q9ULU4 1186 aaPredicted RBP7.59□□□□□ -1.19
TMEM260-209ENST00000556079 RABGAP1Q9Y3P9 1069 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 RIPK3Q9Y572 518 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 ZNF236Q9UL36 1845 aa7.59□□□□□ -1.19
TMEM260-209ENST00000556079 PLIN4Q96Q06 1357 aa7.59□□□□□ -1.2
TMEM260-209ENST00000556079 F5H6K3 240 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 WDR46O15213 610 aaKnown RBP7.58□□□□□ -1.2
TMEM260-209ENST00000556079 RANBP6O60518 1105 aaKnown RBP7.58□□□□□ -1.2
TMEM260-209ENST00000556079 HMGCRP04035 888 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 TSPY3P0CV98 308 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 TSPY8P0CW00 308 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 GNAT2P19087 354 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 PTGS1P23219 599 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 PTPREP23469 700 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 KLRC3Q07444 240 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 CACNB2Q08289 660 aaPredicted RBP7.58□□□□□ -1.2
TMEM260-209ENST00000556079 IRF5Q13568 498 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 COG2Q14746 738 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 MCMDC2Q4G0Z9 681 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 TPRNQ4KMQ1 711 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 PRAMEF19Q5SWL8 479 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 TTC22Q5TAA0 569 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 KCTD1Q719H9 257 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 Q7L0L9 218 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 NCAPG2Q86XI2 1143 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 C7orf61Q8IZ16 206 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 NEDD1Q8NHV4 660 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 PXYLP1Q8TE99 480 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 LENG1Q96BZ8 264 aaPredicted RBP7.58□□□□□ -1.2
TMEM260-209ENST00000556079 CRISPLD2Q9H0B8 497 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 CPVLQ9H3G5 476 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms