RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 HELLSQ9NRZ9 838 aa15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 ANAPC4Q9UJX5 808 aa15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 COL11A1P12107 1806 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 DNAJC25-GNG10A0A024R161 153 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 KBTBD13C9JR72 458 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 PLA2G6O60733 806 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 ZBED4O75132 1171 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 MAGEA10P43363 369 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 SNX17Q15036 470 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 ALX1Q15699 326 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 LRIT3Q3SXY7 679 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 C1orf53Q5VUE5 145 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 SNRNP48Q6IEG0 339 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 MAMDC4Q6UXC1 1216 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 ZNF467Q7Z7K2 595 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 STK11IPQ8N1F8 1099 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 FBXO40Q9UH90 709 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 SYNGAP1Q96PV0 1343 aa15.09■□□□□ 0.01
HNRNPC-221ENST00000555883 FGRP09769 529 aa15.08■□□□□ 0
HNRNPC-221ENST00000555883 SYN1P17600 705 aa15.08■□□□□ 0
HNRNPC-221ENST00000555883 NOVP48745 357 aa15.08■□□□□ 0
HNRNPC-221ENST00000555883 TFAP4Q01664 338 aa15.08■□□□□ 0
HNRNPC-221ENST00000555883 TDHQ8IZJ6 230 aa15.08■□□□□ 0
HNRNPC-221ENST00000555883 PGK2P07205 417 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 RARBP10826 455 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 BMP3P12645 472 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 AKR1A1P14550 325 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 STAT2P52630 851 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 FAM160B2Q86V87 743 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 SMC5Q8IY18 1101 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 CHST13Q8NET6 341 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 CNPY2Q9Y2B0 182 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 RIPK3Q9Y572 518 aa15.07■□□□□ 0
HNRNPC-221ENST00000555883 TSPY2A6NKD2 308 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 ORC4O43929 436 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 ZNF865P0CJ78 1059 aaPredicted RBP15.06■□□□□ 0
HNRNPC-221ENST00000555883 LRRC41Q15345 812 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 MCMDC2Q4G0Z9 681 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 FAM47AQ5JRC9 791 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 PRAMEF19Q5SWL8 479 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 GJC2Q5T442 439 aaPredicted RBP15.06■□□□□ 0
HNRNPC-221ENST00000555883 SLFN13Q68D06 897 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 SLC39A5Q6ZMH5 540 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 LRRC47Q8N1G4 583 aaKnown RBP15.06■□□□□ 0
HNRNPC-221ENST00000555883 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 KIFC2Q96AC6 838 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 DDX11Q96FC9 970 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 UBE2OQ9C0C9 1292 aaKnown RBP15.06■□□□□ 0
HNRNPC-221ENST00000555883 XPNPEP3Q9NQH7 507 aa15.06■□□□□ 0
HNRNPC-221ENST00000555883 CTDP1Q9Y5B0 961 aaPredicted RBP15.06■□□□□ 0
HNRNPC-221ENST00000555883 MYH4Q9Y623 1939 aa15.05■□□□□ 0
HNRNPC-221ENST00000555883 SOX1O00570 391 aaPredicted RBP15.05■□□□□ -0
HNRNPC-221ENST00000555883 PCP11498 1178 aaKnown RBP15.05■□□□□ -0
HNRNPC-221ENST00000555883 SLC1A4P43007 532 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 NT5C2P49902 561 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 RTP1P59025 263 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 CCDC129Q6ZRS4 1044 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 RNF180Q86T96 592 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 STAG1Q8WVM7 1258 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
HNRNPC-221ENST00000555883 OSBPL3Q9H4L5 887 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 PHF24Q9UPV7 400 aa15.05■□□□□ -0
HNRNPC-221ENST00000555883 TMEM232C9JQI7 657 aa15.04■□□□□ -0
HNRNPC-221ENST00000555883 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
HNRNPC-221ENST00000555883 TKFCQ3LXA3 575 aa15.04■□□□□ -0
HNRNPC-221ENST00000555883 VPS53Q5VIR6 699 aa15.04■□□□□ -0
HNRNPC-221ENST00000555883 CPXCR1Q8N123 301 aa15.04■□□□□ -0
HNRNPC-221ENST00000555883 TSEN34Q9BSV6 310 aaKnown RBP15.04■□□□□ -0
HNRNPC-221ENST00000555883 RAVER2Q9HCJ3 691 aaKnown RBP15.04■□□□□ -0
HNRNPC-221ENST00000555883 IL17RBQ9NRM6 502 aa15.04■□□□□ -0
HNRNPC-221ENST00000555883 PRKAG2Q9UGJ0 569 aa15.04■□□□□ -0
HNRNPC-221ENST00000555883 STX8Q9UNK0 236 aa15.04■□□□□ -0
HNRNPC-221ENST00000555883 ZNFX1Q9P2E3 1918 aaKnown RBP15.04■□□□□ -0
HNRNPC-221ENST00000555883 LAMA2P24043 3122 aaKnown RBP15.03■□□□□ -0
HNRNPC-221ENST00000555883 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 SNAI1O95863 264 aaPredicted RBP15.03■□□□□ -0
HNRNPC-221ENST00000555883 FGAP02671 866 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 MFAP1P55081 439 aaKnown RBP15.03■□□□□ -0
HNRNPC-221ENST00000555883 CTDSPL2Q05D32 466 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 ANO1Q5XXA6 986 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 RCSD1Q6JBY9 416 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 ANKRD35Q8N283 1001 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 LBHD1Q9BQE6 289 aaPredicted RBP15.03■□□□□ -0
HNRNPC-221ENST00000555883 TCP11L1Q9NUJ3 509 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 FAM184BQ9ULE4 1060 aa15.03■□□□□ -0
HNRNPC-221ENST00000555883 ZNF536O15090 1300 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 A0A0D9SFI3 127 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 ADAMTS4O75173 837 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 HSPD1P10809 573 aaKnown RBP15.02■□□□□ -0
HNRNPC-221ENST00000555883 TAL1P17542 331 aaPredicted RBP15.02■□□□□ -0
HNRNPC-221ENST00000555883 CST5P28325 142 aaPredicted RBP15.02■□□□□ -0
HNRNPC-221ENST00000555883 ADCYAP1R1P41586 468 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 LRCH3Q96II8 777 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 FAM227BQ96M60 508 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 LNPKQ9C0E8 428 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 ABHD16BQ9H3Z7 469 aa15.02■□□□□ -0
HNRNPC-221ENST00000555883 ACAD9Q9H845 621 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms