RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 SLF1Q9BQI6 1058 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 NACAP1Q9BZK3 213 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 IL17RBQ9NRM6 502 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 LRRC37A2A6NM11 1700 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 STRNO43815 780 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 EVI5O60447 810 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 TTLL1O95922 423 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 FGRP09769 529 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 STAT3P40763 770 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 TFAP4Q01664 338 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 AAMPQ13685 434 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 LRRC26Q2I0M4 334 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 ZNF792Q3KQV3 632 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 PRAMEF19Q5SWL8 479 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 DPP9Q86TI2 863 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 HELLSQ9NRZ9 838 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 ANAPC4Q9UJX5 808 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 ZMYND8Q9ULU4 1186 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 SYNPO2Q9UMS6 1093 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 ZMYM6O95789 1325 aa11.07□□□□□ -0.64
VIPAS39-207ENST00000555854 LCTP09848 1927 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 SLC25A27O95847 323 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 TSPY3P0CV98 308 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 TSPY8P0CW00 308 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 TAL1P17542 331 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 PDE4AP27815 886 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 PDE4BQ07343 736 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 ALX1Q15699 326 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 ANO1Q5XXA6 986 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 SLFN13Q68D06 897 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 SNRNP48Q6IEG0 339 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 TBC1D10CQ8IV04 446 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 ZNF444Q8N0Y2 327 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 LENG1Q96BZ8 264 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 MMP19Q99542 508 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 TEX13BQ9BXU2 312 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 IL25Q9H293 177 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 OSBPL3Q9H4L5 887 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 SLC38A10Q9HBR0 1119 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 ZNF536O15090 1300 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 CCDC171Q6TFL3 1326 aa11.06□□□□□ -0.64
VIPAS39-207ENST00000555854 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 ATP2A1O14983 1001 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 SEPT4O43236 478 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 ORC4O43929 436 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 FGAP02671 866 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 FCER1AP12319 257 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 SYN1P17600 705 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 MCMDC2Q4G0Z9 681 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 CHMP4CQ96CF2 233 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 GMCL1Q96IK5 515 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 GDF15Q99988 308 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 ZNF287Q9HBT7 754 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 RAVER2Q9HCJ3 691 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 MCM3APO60318 1980 aa11.05□□□□□ -0.64
VIPAS39-207ENST00000555854 CDH23Q9H251 3354 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 MSCO60682 206 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 ZNF865P0CJ78 1059 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 BMP3P12645 472 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 CNGA1P29973 690 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 HAND2P61296 217 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 GJC2Q5T442 439 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 PRPF38AQ8NAV1 312 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 RWDD1Q9H446 243 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 STX8Q9UNK0 236 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 SMCHD1A6NHR9 2005 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 ASTN1O14525 1302 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 NEDD4P46934 1319 aa11.04□□□□□ -0.64
VIPAS39-207ENST00000555854 EYSQ5T1H1 3165 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 TSPY2A6NKD2 308 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 TMEM232C9JQI7 657 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 DNM1LO00429 736 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 ADCY6O43306 1168 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 SLC3A2P08195 630 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 GSPT1P15170 499 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 SDSP20132 328 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 MCCP23508 829 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 COPB2P35606 906 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 IRX6P78412 446 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 KCTD2Q14681 263 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 RCSD1Q6JBY9 416 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 TICAM2Q86XR7 235 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 CPXCR1Q8N123 301 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 RILPL2Q969X0 211 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 TINF2Q9BSI4 451 aa11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-207ENST00000555854 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms