RNA–Protein interactions for RNA: ENST00000555568.5

NSFL1C-212, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-212ENST00000555568 KIFC2Q96AC6 838 aa21.5■■□□□ 1.03
NSFL1C-212ENST00000555568 LENG1Q96BZ8 264 aaPredicted RBP21.5■■□□□ 1.03
NSFL1C-212ENST00000555568 DDX11Q96FC9 970 aa21.5■■□□□ 1.03
NSFL1C-212ENST00000555568 CEP95Q96GE4 821 aa21.5■■□□□ 1.03
NSFL1C-212ENST00000555568 RIPK3Q9Y572 518 aa21.5■■□□□ 1.03
NSFL1C-212ENST00000555568 MYH4Q9Y623 1939 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 PATL2C9JE40 543 aaKnown RBP21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 DLL1O00548 723 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 ZBED4O75132 1171 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 C1orf53Q5VUE5 145 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 SH3RF1Q7Z6J0 888 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 IFNL3Q8IZI9 196 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 LRRC47Q8N1G4 583 aaKnown RBP21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 NACAP1Q9BZK3 213 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 TTC41PQ6P2S7 1318 aa21.49■■□□□ 1.03
NSFL1C-212ENST00000555568 ERC2O15083 957 aa21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 TLE2Q04725 743 aa21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 MSL3Q8N5Y2 521 aaKnown RBP21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 SEC62Q99442 399 aaKnown RBP21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 FSD1Q9BTV5 496 aa21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 RAVER2Q9HCJ3 691 aaKnown RBP21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 MTMR4Q9NYA4 1195 aa21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 ISY1Q9ULR0 285 aaKnown RBP21.48■■□□□ 1.03
NSFL1C-212ENST00000555568 A0A1W2PQ45 241 aaPredicted RBP21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 A0A1W2PQY0 241 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 TRIM43BA6NCK2 446 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 ATP2A1O14983 1001 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 TTLL1O95922 423 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 TSPY3P0CV98 308 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 TSPY8P0CW00 308 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 SHHQ15465 462 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 TRIM43Q96BQ3 446 aaPredicted RBP21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 FAM161BQ96MY7 647 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 FEM1BQ9UK73 627 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 ZHX1Q9UKY1 873 aaPredicted RBP21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 SYNGAP1Q96PV0 1343 aa21.47■■□□□ 1.03
NSFL1C-212ENST00000555568 COL6A3P12111 3177 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 SMCHD1A6NHR9 2005 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 POTEB2H3BUK9 544 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 CLTBP09497 229 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 PDE4BQ07343 736 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 C9orf50Q5SZB4 431 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 FAM109BQ6ICB4 259 aaPredicted RBP21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 GMCL1P1Q8NEA9 526 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 PI4K2BQ8TCG2 481 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 OTUD7AQ8TE49 926 aaPredicted RBP21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 MKL1Q969V6 931 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 NAPBQ9H115 298 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 SLC38A10Q9HBR0 1119 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 FAM184BQ9ULE4 1060 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 SYNPO2Q9UMS6 1093 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 PLIN4Q96Q06 1357 aa21.46■■□□□ 1.03
NSFL1C-212ENST00000555568 DNAJC25-GNG10A0A024R161 153 aa21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 PQBP1O60828 265 aaKnown RBP21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 ADAMTS4O75173 837 aa21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 SNAI1O95863 264 aaPredicted RBP21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 SLC3A2P08195 630 aaKnown RBP21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 ZNF697Q5TEC3 545 aa21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 SLFN13Q68D06 897 aa21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 PCDHB15Q9Y5E8 787 aa21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 TACC3Q9Y6A5 838 aa21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 SYNRGQ9UMZ2 1314 aa21.45■■□□□ 1.02
NSFL1C-212ENST00000555568 BMP3P12645 472 aa21.44■■□□□ 1.02
NSFL1C-212ENST00000555568 PPARAQ07869 468 aa21.44■■□□□ 1.02
NSFL1C-212ENST00000555568 MAMDC4Q6UXC1 1216 aa21.44■■□□□ 1.02
NSFL1C-212ENST00000555568 ANKRD35Q8N283 1001 aa21.44■■□□□ 1.02
NSFL1C-212ENST00000555568 NEDD1Q8NHV4 660 aa21.44■■□□□ 1.02
NSFL1C-212ENST00000555568 GUCD1Q96NT3 240 aa21.44■■□□□ 1.02
NSFL1C-212ENST00000555568 FBXO40Q9UH90 709 aa21.44■■□□□ 1.02
NSFL1C-212ENST00000555568 MX1P20591 662 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 ACLYP53396 1101 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 OAZ1P54368 228 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 TFAP4Q01664 338 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 ZMYM1Q5SVZ6 1142 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 ZNF467Q7Z7K2 595 aaPredicted RBP21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 CHST13Q8NET6 341 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 TSEN34Q9BSV6 310 aaKnown RBP21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 STARD7Q9NQZ5 370 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 HOMER2Q9NSB8 354 aa21.43■■□□□ 1.02
NSFL1C-212ENST00000555568 RAG1P15918 1043 aa21.42■■□□□ 1.02
NSFL1C-212ENST00000555568 ITGB8P26012 769 aa21.42■■□□□ 1.02
NSFL1C-212ENST00000555568 IKQ13123 557 aaPredicted RBP21.42■■□□□ 1.02
NSFL1C-212ENST00000555568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.42■■□□□ 1.02
NSFL1C-212ENST00000555568 NUP133Q8WUM0 1156 aa21.42■■□□□ 1.02
NSFL1C-212ENST00000555568 CHMP4CQ96CF2 233 aa21.42■■□□□ 1.02
NSFL1C-212ENST00000555568 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
NSFL1C-212ENST00000555568 MOXD2PA6NHM9 499 aa21.41■■□□□ 1.02
NSFL1C-212ENST00000555568 TMEM232C9JQI7 657 aa21.41■■□□□ 1.02
NSFL1C-212ENST00000555568 DUSP11O75319 330 aaKnown RBP21.41■■□□□ 1.02
NSFL1C-212ENST00000555568 STAT2P52630 851 aa21.41■■□□□ 1.02
NSFL1C-212ENST00000555568 ACVR2BQ13705 512 aa21.41■■□□□ 1.02
NSFL1C-212ENST00000555568 TMEM39AQ9NV64 488 aa21.41■■□□□ 1.02
NSFL1C-212ENST00000555568 MYADML2A6NDP7 307 aa21.4■■□□□ 1.02
NSFL1C-212ENST00000555568 KIAA0355O15063 1070 aa21.4■■□□□ 1.02
NSFL1C-212ENST00000555568 SLC1A4P43007 532 aa21.4■■□□□ 1.02
NSFL1C-212ENST00000555568 KCNA10Q16322 511 aa21.4■■□□□ 1.02
NSFL1C-212ENST00000555568 CCDC129Q6ZRS4 1044 aa21.4■■□□□ 1.02
NSFL1C-212ENST00000555568 ARMCX2Q7L311 632 aa21.4■■□□□ 1.02
NSFL1C-212ENST00000555568 KLHDC9Q8NEP7 349 aa21.4■■□□□ 1.02
NSFL1C-212ENST00000555568 FGD4Q96M96 766 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms