RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SYCP3Q8IZU3 236 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 DAGLAQ9Y4D2 1042 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 TRAF5O00463 557 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 ECE2O60344 883 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 DDR1Q08345 913 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 SLC30A10Q6XR72 485 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 IGSF22Q8N9C0 903 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 GUCA1BQ9UMX6 200 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 ALAS1P13196 640 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 ABCB5Q2M3G0 1257 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 HERC4Q5GLZ8 1057 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 UBXN4Q92575 508 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 FMN2Q9NZ56 1722 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 NPR1P16066 1061 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 DCAF17Q5H9S7 520 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 PUF60Q9UHX1 559 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 GDAQ9Y2T3 454 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 POTEMA6NI47 508 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 RNASE9P60153 205 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 CSGALNACT2Q8N6G5 542 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 MASTLQ96GX5 879 aa13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 PDGFDQ9GZP0 370 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF40-206ENST00000555232 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 SYNRGQ9UMZ2 1314 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 TPH2Q8IWU9 490 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 CNKSR1Q969H4 720 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 BRIP1Q9BX63 1249 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 FAM207AQ9NSI2 230 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 CCDC144BQ3MJ40 725 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 ATL3Q6DD88 541 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 CAPZA3Q96KX2 299 aa13.73□□□□□ -0.21
ARHGEF40-206ENST00000555232 SEMA3EO15041 775 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 AKR1B10O60218 316 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 HARSP12081 509 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 AMPD3Q01432 767 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 EARS2Q5JPH6 523 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 NELFBQ8WX92 580 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 TCRBV5S4A2TA0A5A2 114 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 SFI1A8K8P3 1242 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 GSDMDP57764 484 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 TBC1D8BQ0IIM8 1120 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 FMR1NBQ8N0W7 255 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 OGFRQ9NZT2 677 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
ARHGEF40-206ENST00000555232 TRIM49BA6NDI0 452 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 TBCAO75347 108 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 BMP15O95972 392 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 SV2BQ7L1I2 683 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 PCDHA12Q9UN75 941 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 NEK8Q86SG6 692 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 TTLL6Q8N841 843 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 KNDC1Q76NI1 1749 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 IRX3P78415 501 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 CUL4BQ13620 913 aa13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 ZNF526Q8TF50 670 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 FOXP1Q9H334 677 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-206ENST00000555232 FLT1P17948 1338 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 MACROD2A1Z1Q3 448 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 DDAH1O94760 285 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 TTLL1O95922 423 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 EEF2P13639 858 aaKnown RBP13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 CASQ1P31415 396 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 TSG101Q99816 390 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 BAG1Q99933 345 aaPredicted RBP13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 COA1Q9GZY4 146 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 MAN1B1Q9UKM7 699 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 GINS2Q9Y248 185 aa13.71□□□□□ -0.22
ARHGEF40-206ENST00000555232 AP5Z1O43299 807 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 CAVIN2O95810 425 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 ANKRD13CQ8N6S4 541 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 FOXP2O15409 715 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 TDP2O95551 362 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 KRT9P35527 623 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 RC3H1Q5TC82 1133 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 EEPD1Q7L9B9 569 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 SGMS1Q86VZ5 419 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 JADE2Q9NQC1 790 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 POLR3GO15318 223 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 PRPF3O43395 683 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms