RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
ABCD4-221ENST00000554453 PLEKHM2Q8IWE5 1019 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 TINF2Q9BSI4 451 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 SENP6Q9GZR1 1112 aaPredicted RBP13.2□□□□□ -0.3
ABCD4-221ENST00000554453 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 SLC38A10Q9HBR0 1119 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 ZMYND8Q9ULU4 1186 aaPredicted RBP13.2□□□□□ -0.3
ABCD4-221ENST00000554453 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 TACC3Q9Y6A5 838 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
ABCD4-221ENST00000554453 A0A0G2JMZ2 1700 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 ORC4O43929 436 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 PLA2G6O60733 806 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 PGK2P07205 417 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 BMP3P12645 472 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 NOVP48745 357 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 NUCB1Q02818 461 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 LRRC26Q2I0M4 334 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 SNRNP48Q6IEG0 339 aaKnown RBP13.19□□□□□ -0.3
ABCD4-221ENST00000554453 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 CHURC1Q8WUH1 139 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 IL17RBQ9NRM6 502 aa13.19□□□□□ -0.3
ABCD4-221ENST00000554453 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-221ENST00000554453 ZNF236Q9UL36 1845 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 TSPY2A6NKD2 308 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 DNM1LO00429 736 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
ABCD4-221ENST00000554453 OAZ1P54368 228 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 LRRC47Q8N1G4 583 aaKnown RBP13.18□□□□□ -0.3
ABCD4-221ENST00000554453 MSL3Q8N5Y2 521 aaKnown RBP13.18□□□□□ -0.3
ABCD4-221ENST00000554453 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 DDX11Q96FC9 970 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 GMCL1Q96IK5 515 aa13.18□□□□□ -0.3
ABCD4-221ENST00000554453 RAVER2Q9HCJ3 691 aaKnown RBP13.18□□□□□ -0.3
ABCD4-221ENST00000554453 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 ZNF865P0CJ78 1059 aaPredicted RBP13.17□□□□□ -0.3
ABCD4-221ENST00000554453 SYN1P17600 705 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 SDSP20132 328 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 MCCP23508 829 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 SLC1A4P43007 532 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
ABCD4-221ENST00000554453 GJC2Q5T442 439 aaPredicted RBP13.17□□□□□ -0.3
ABCD4-221ENST00000554453 ANO1Q5XXA6 986 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 MAMDC4Q6UXC1 1216 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 RILPL2Q969X0 211 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
ABCD4-221ENST00000554453 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
ABCD4-221ENST00000554453 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
ABCD4-221ENST00000554453 SNAI1O95863 264 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-221ENST00000554453 TAL1P17542 331 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-221ENST00000554453 MAGEA10P43363 369 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-221ENST00000554453 SLC4A3P48751 1232 aa13.16□□□□□ -0.3
ABCD4-221ENST00000554453 LRRC41Q15345 812 aa13.16□□□□□ -0.3
ABCD4-221ENST00000554453 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
ABCD4-221ENST00000554453 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-221ENST00000554453 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
ABCD4-221ENST00000554453 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
ABCD4-221ENST00000554453 NMT2O60551 498 aa13.15□□□□□ -0.3
ABCD4-221ENST00000554453 RARBP10826 455 aa13.15□□□□□ -0.3
ABCD4-221ENST00000554453 STAT2P52630 851 aa13.15□□□□□ -0.3
ABCD4-221ENST00000554453 ATN1P54259 1190 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-221ENST00000554453 MFAP1P55081 439 aaKnown RBP13.15□□□□□ -0.3
ABCD4-221ENST00000554453 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
ABCD4-221ENST00000554453 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-221ENST00000554453 TTC14Q96N46 770 aa13.15□□□□□ -0.3
ABCD4-221ENST00000554453 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.3
ABCD4-221ENST00000554453 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
ABCD4-221ENST00000554453 ZMYM6O95789 1325 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 CCDC171Q6TFL3 1326 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 FRMPD3Q5JV73 1810 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
ABCD4-221ENST00000554453 AKR1A1P14550 325 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 C1orf53Q5VUE5 145 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 ANKRD35Q8N283 1001 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 MCM3APO60318 1980 aa13.14□□□□□ -0.31
ABCD4-221ENST00000554453 ZNF536O15090 1300 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
ABCD4-221ENST00000554453 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 RTP1P59025 263 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 SNX17Q15036 470 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 MFSD6Q6ZSS7 791 aa13.13□□□□□ -0.31
ABCD4-221ENST00000554453 RNF180Q86T96 592 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms