RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 IFIT2P09913 472 aaKnown RBP13.91□□□□□ -0.18
TUBB3-204ENST00000554116 RARBP10826 455 aa13.91□□□□□ -0.18
TUBB3-204ENST00000554116 UBE3CQ15386 1083 aa13.91□□□□□ -0.18
TUBB3-204ENST00000554116 C16orf59Q7L2K0 433 aa13.91□□□□□ -0.18
TUBB3-204ENST00000554116 ANKRD33Q7Z3H0 272 aa13.91□□□□□ -0.18
TUBB3-204ENST00000554116 RPAP2Q8IXW5 612 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-204ENST00000554116 USP38Q8NB14 1042 aa13.91□□□□□ -0.18
TUBB3-204ENST00000554116 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
TUBB3-204ENST00000554116 SYNRGQ9UMZ2 1314 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
TUBB3-204ENST00000554116 RASA1P20936 1047 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 GRIN2CQ14957 1233 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 MAMDC4Q6UXC1 1216 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 CHMP4BQ9H444 224 aaKnown RBP13.9□□□□□ -0.18
TUBB3-204ENST00000554116 SH2D4AQ9H788 454 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 TBX21Q9UL17 535 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
TUBB3-204ENST00000554116 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 GSG1L2A8MUP6 293 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 CTAGE5O15320 804 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 CDK7P50613 346 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 ACLYP53396 1101 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 TJAP1Q5JTD0 557 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 C20orf194Q5TEA3 1177 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 RNF180Q86T96 592 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 TOX2Q96NM4 488 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 STRBPQ96SI9 672 aaKnown RBP13.89□□□□□ -0.19
TUBB3-204ENST00000554116 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
TUBB3-204ENST00000554116 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
TUBB3-204ENST00000554116 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-204ENST00000554116 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 NDUFB10O96000 172 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 AKR1A1P14550 325 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 COL9A1P20849 921 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 KCTD2Q14681 263 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 KCNA10Q16322 511 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
TUBB3-204ENST00000554116 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
TUBB3-204ENST00000554116 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
TUBB3-204ENST00000554116 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.88□□□□□ -0.19
TUBB3-204ENST00000554116 KATNBL1Q9H079 304 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 EPB41L4AQ9HCS5 686 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-204ENST00000554116 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
TUBB3-204ENST00000554116 F5H6K3 240 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 RAG1P15918 1043 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 KLRC3Q07444 240 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 OSBP2Q969R2 916 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 SLF1Q9BQI6 1058 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 NYAP2Q9P242 653 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 SYNGAP1Q96PV0 1343 aa13.87□□□□□ -0.19
TUBB3-204ENST00000554116 GRXCR1A8MXD5 290 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 DUSP11O75319 330 aaKnown RBP13.86□□□□□ -0.19
TUBB3-204ENST00000554116 HMMRO75330 724 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 TIMP1P01033 207 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 DNAJB2P25686 324 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 PBX2P40425 430 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 FPGSQ05932 587 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 TMEM240Q5SV17 173 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
TUBB3-204ENST00000554116 STK11IPQ8N1F8 1099 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
TUBB3-204ENST00000554116 MKL1Q969V6 931 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 TEX13BQ9BXU2 312 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 UPF3AQ9H1J1 476 aaKnown RBP13.86□□□□□ -0.19
TUBB3-204ENST00000554116 GBF1Q92538 1859 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 ASTN1O14525 1302 aa13.86□□□□□ -0.19
TUBB3-204ENST00000554116 MOXD2PA6NHM9 499 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 PTGS1P23219 599 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 CST5P28325 142 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-204ENST00000554116 ACVR2BQ13705 512 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 ZNF467Q7Z7K2 595 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-204ENST00000554116 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
TUBB3-204ENST00000554116 VWCEQ96DN2 955 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.85□□□□□ -0.19
TUBB3-204ENST00000554116 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 RAVER2Q9HCJ3 691 aaKnown RBP13.85□□□□□ -0.19
TUBB3-204ENST00000554116 STARD7Q9NQZ5 370 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-204ENST00000554116 FAM184BQ9ULE4 1060 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 LCTP09848 1927 aa13.85□□□□□ -0.19
TUBB3-204ENST00000554116 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-204ENST00000554116 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-204ENST00000554116 RAD21O60216 631 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 ASGR1P07306 291 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 COPB2P35606 906 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 GJA9P57773 515 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 NKX3-2P78367 333 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 CCDC144BQ3MJ40 725 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 MFSD5Q6N075 450 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 CPXCR1Q8N123 301 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 ZNF576Q9H609 170 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 ARPP21Q9UBL0 812 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-204ENST00000554116 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms