RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 IFNL3Q8IZI9 196 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 SSH3Q8TE77 659 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 RUFY2Q8WXA3 655 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CEP95Q96GE4 821 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 AGBL1Q96MI9 1066 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 PRDM10Q9NQV6 1147 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 TMEM39AQ9NV64 488 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 HOXC10Q9NYD6 342 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 SRRDQ9UH36 339 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 NHSQ6T4R5 1651 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 NUP188Q5SRE5 1749 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CACNA1SQ13698 1873 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 AHCTF1Q8WYP5 2266 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CHMP2AO43633 222 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CIAO1O76071 339 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ZBTB48P10074 688 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 RARBP10826 455 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP14P54578 494 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ERVK-9P63128 1117 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ERVK-24P63145 666 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 GUCY1B3Q02153 619 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CNTN2Q02246 1040 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 PPIL2Q13356 520 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 RABL6Q3YEC7 729 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 TMEM67Q5HYA8 995 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CHD1LQ86WJ1 897 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 IFNLR1Q8IU57 520 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ARHGAP45Q92619 1136 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 GLG1Q92896 1179 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 PGBD1Q96JS3 809 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 GLT1D1Q96MS3 346 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 FAM49AQ9H0Q0 323 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 KANSL2Q9H9L4 492 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 TXNRD2Q9NNW7 524 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ZBTB40Q9NUA8 1239 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 SEC63Q9UGP8 760 aaKnown RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 TNS1Q9HBL0 1735 aaKnown RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 SBF2Q86WG5 1849 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 COL3A1P02461 1466 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 FAM205AQ6ZU69 1335 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 GPR75-ASB3A0A0A6YYF3 556 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 A0A0D9SFI3 127 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 M0R2C6 588 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 ENTPD3O75355 529 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 FGAP02671 866 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 BMP3P12645 472 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 CCND3P30281 292 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 RBM25P49756 843 aaKnown RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 PDE1AP54750 535 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 PPARAQ07869 468 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 PDE4DQ08499 809 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 TMEM62Q0P6H9 643 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 DHX8Q14562 1220 aaKnown RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 RRP1BQ14684 758 aaKnown RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 BRDTQ58F21 947 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 FAM83AQ86UY5 434 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 SIRT2Q8IXJ6 389 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 MYOCDQ8IZQ8 938 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 JMYQ8N9B5 988 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 KBTBD3Q8NAB2 608 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 CTCFLQ8NI51 663 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 SMARCC2Q8TAQ2 1214 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 APPBP2Q92624 585 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 ESR2Q92731 530 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 SH2D3AQ9BRG2 576 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 MLXIPQ9HAP2 919 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 STARD7Q9NQZ5 370 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 RNF146Q9NTX7 359 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 HERC5Q9UII4 1024 aaKnown RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 PTPN22Q9Y2R2 807 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 MRVI1Q9Y6F6 885 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 C4AP0C0L4 1744 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 C5P01031 1676 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 A0A1W2PRG0 241 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 CXCL11O14625 94 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 NDUFB10O96000 172 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 SSBP05455 408 aaKnown RBP eCLIP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 FGFR2P21802 821 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 RGS2P41220 211 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 STAT2P52630 851 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 JAG1P78504 1218 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 SETQ01105 290 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 MCMDC2Q4G0Z9 681 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 SYDE2Q5VT97 1194 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 ARHGEF16Q5VV41 709 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 TMED8Q6PL24 325 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 TMEM179Q6ZVK1 233 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 MAEAQ7L5Y9 396 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 GPR142Q7Z601 462 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 FBXO16Q8IX29 292 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 METTL13Q8N6R0 699 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 CHURC1Q8WUH1 139 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 LRCH3Q96II8 777 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 NAP1L5Q96NT1 182 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-205ENST00000554081 ZHX3Q9H4I2 956 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 XPNPEP3Q9NQH7 507 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 CCDC88AQ3V6T2 1871 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 COL6A3P12111 3177 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 APC2O95996 2303 aa2.92□□□□□ -1.94
PRPF39-205ENST00000554081 CALM1P0DP23 149 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms