RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LRRC10BA6NIK2 292 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 SOWAHDA6NJG2 315 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 DCDC2CA8MYV0 355 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 BMP6P22004 513 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 ZC3H6P61129 1189 aaKnown RBP4.71□□□□□ -1.66
SLIRP-202ENST00000553981 ZP2Q05996 745 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 RING1Q06587 406 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 IKZF1Q13422 519 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 DSC3Q14574 896 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 NKPD1Q17RQ9 610 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 FBLN7Q53RD9 439 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 CCER1Q8TC90 406 aaPredicted RBP4.71□□□□□ -1.66
SLIRP-202ENST00000553981 FAM84AQ96KN4 292 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 SLC38A3Q99624 504 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 SBF2Q86WG5 1849 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 SSH2Q76I76 1423 aa4.71□□□□□ -1.66
SLIRP-202ENST00000553981 COL18A1P39060 1754 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 TOPAZ1Q8N9V7 1692 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 ARHGEF10O15013 1369 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 PNMA6FA0A0J9YX94 578 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 ZNF503-AS2A6NEH8 195 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 ENC1O14682 589 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 PAGE1O75459 146 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 EOMESO95936 686 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 C12orf40Q86WS4 652 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 USP35Q9P2H5 1018 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 DCTN4Q9UJW0 460 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 CTNND2Q9UQB3 1225 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 PITPNM2Q9BZ72 1349 aa4.7□□□□□ -1.66
SLIRP-202ENST00000553981 GNAT3A8MTJ3 354 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.69□□□□□ -1.66
SLIRP-202ENST00000553981 FANCGO15287 622 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 TREHO43280 583 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 YY1P25490 414 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 CLCN7P51798 805 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 PLCB3Q01970 1234 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 ENOX2Q16206 610 aaKnown RBP4.69□□□□□ -1.66
SLIRP-202ENST00000553981 KCNMB1Q16558 191 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 MLANAQ16655 118 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 ZBTB37Q5TC79 503 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 FYB2Q5VWT5 728 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 TPTE2Q6XPS3 522 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 RETREG2Q8NC44 543 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 PRDM11Q9NQV5 511 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 PICK1Q9NRD5 415 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 FAM53CQ9NYF3 392 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 MYOM1P52179 1685 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 USP19O94966 1318 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 ACEP12821 1306 aa4.69□□□□□ -1.66
SLIRP-202ENST00000553981 PARP4Q9UKK3 1724 aaKnown RBP4.69□□□□□ -1.66
SLIRP-202ENST00000553981 LRRC37A3O60309 1634 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 RGPD5Q99666 1765 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 POLR3AO14802 1390 aaPredicted RBP4.68□□□□□ -1.66
SLIRP-202ENST00000553981 FBXO24O75426 580 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 GSTT1P30711 240 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 NBPF8Q3BBV2 869 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 RASIP1Q5U651 963 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 CILP2Q8IUL8 1156 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 MARCH10Q8NA82 808 aaPredicted RBP4.68□□□□□ -1.66
SLIRP-202ENST00000553981 BHLHE22Q8NFJ8 381 aaPredicted RBP4.68□□□□□ -1.66
SLIRP-202ENST00000553981 LIN37Q96GY3 246 aaPredicted RBP4.68□□□□□ -1.66
SLIRP-202ENST00000553981 CDK19Q9BWU1 502 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 PCDHA4Q9UN74 947 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 MAPK8IP1Q9UQF2 711 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 SAMM50Q9Y512 469 aa4.68□□□□□ -1.66
SLIRP-202ENST00000553981 COL5A2P05997 1499 aaPredicted RBP4.68□□□□□ -1.66
SLIRP-202ENST00000553981 RAB3GAP2Q9H2M9 1393 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 KCNQ2O43526 872 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 LLGL2Q6P1M3 1020 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 FAM196AQ6ZSG2 479 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 CDC37L1Q7L3B6 337 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 ARMCX6Q7L4S7 300 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 KCT2Q8NC54 265 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 OSBPL7Q9BZF2 842 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 FOXQ1Q9C009 403 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 CEP44Q9C0F1 390 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 SRCIN1Q9C0H9 1055 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 PRDM5Q9NQX1 630 aaPredicted RBP4.67□□□□□ -1.66
SLIRP-202ENST00000553981 SEMA3GQ9NS98 782 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 LMCD1Q9NZU5 365 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 POGKQ9P215 609 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 BIN2Q9UBW5 565 aaPredicted RBP4.67□□□□□ -1.66
SLIRP-202ENST00000553981 PPM1HQ9ULR3 514 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 CNTNAP4Q9C0A0 1308 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 WNK3Q9BYP7 1800 aa4.67□□□□□ -1.66
SLIRP-202ENST00000553981 PAPPAQ13219 1627 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 PRR33A8MZF0 331 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 LRIG2O94898 1065 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 SLITRK5O94991 958 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 ZBTB7AO95365 584 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 MAPK1P28482 360 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 AFMP43652 599 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 INPP5AQ14642 412 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 LRRC14Q15048 493 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 TCP11L2Q8N4U5 519 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 NGDNQ8NEJ9 315 aaKnown RBP4.66□□□□□ -1.66
SLIRP-202ENST00000553981 ZNF507Q8TCN5 953 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 ELMO3Q96BJ8 720 aa4.66□□□□□ -1.66
SLIRP-202ENST00000553981 HSPA12BQ96MM6 686 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms