RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ERC2O15083 957 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 WDR46O15213 610 aaKnown RBP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 DUSP11O75319 330 aaKnown RBP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 IDH1O75874 414 aaKnown RBP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 GNAI2P04899 355 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 TRIM27P14373 513 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 PLS1Q14651 629 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 CCDC158Q5M9N0 1113 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 TMEM179Q6ZVK1 233 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 SPICE1Q8N0Z3 855 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 MSL3Q8N5Y2 521 aaKnown RBP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 EAF2Q96CJ1 260 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 KATNBL1Q9H079 304 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 EPHX3Q9H6B9 360 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
PRKCH-208ENST00000553846 UMODL1Q5DID0 1318 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 USP34Q70CQ2 3546 aa11.05□□□□□ -0.64
PRKCH-208ENST00000553846 ARVCFO00192 962 aa11.04□□□□□ -0.64
PRKCH-208ENST00000553846 VWA5AO00534 786 aa11.04□□□□□ -0.64
PRKCH-208ENST00000553846 CYP2D6P10635 497 aa11.04□□□□□ -0.64
PRKCH-208ENST00000553846 AKR1B1P15121 316 aa11.04□□□□□ -0.64
PRKCH-208ENST00000553846 GJA9P57773 515 aa11.04□□□□□ -0.64
PRKCH-208ENST00000553846 CCDC129Q6ZRS4 1044 aa11.04□□□□□ -0.64
PRKCH-208ENST00000553846 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
PRKCH-208ENST00000553846 NOP58Q9Y2X3 529 aaKnown RBP11.04□□□□□ -0.64
PRKCH-208ENST00000553846 COL4A4P53420 1690 aaPredicted RBP11.04□□□□□ -0.64
PRKCH-208ENST00000553846 TCRBV5S4A2TA0A5A2 114 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 ASGR1P07306 291 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 IGFBP4P22692 258 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 CYP2C18P33260 490 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 CCDC174Q6PII3 467 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
PRKCH-208ENST00000553846 TMEM199Q8N511 208 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 PPP1R12CQ9BZL4 782 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 WNT8AQ9H1J5 351 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
PRKCH-208ENST00000553846 MSRAQ9UJ68 235 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 CNPY2Q9Y2B0 182 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 ASTN1O14525 1302 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
PRKCH-208ENST00000553846 PTPRSQ13332 1948 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 A0A0U1RQG5 324 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-208ENST00000553846 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 ANP32CO43423 234 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 TLL1O43897 1013 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 MYOGP15173 224 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 STAT3P40763 770 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 ICA1Q05084 483 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 KCTD2Q14681 263 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 DYNLL2Q96FJ2 89 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 GLT1D1Q96MS3 346 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 NOC4LQ9BVI4 516 aaKnown RBP11.02□□□□□ -0.65
PRKCH-208ENST00000553846 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRKCH-208ENST00000553846 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 RIPK3Q9Y572 518 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 MTCH2Q9Y6C9 303 aa11.02□□□□□ -0.65
PRKCH-208ENST00000553846 LCTP09848 1927 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 MPHOSPH10O00566 681 aaKnown RBP11.01□□□□□ -0.65
PRKCH-208ENST00000553846 ATP2A1O14983 1001 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 GPR37L1O60883 481 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 ARHGEF15O94989 841 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
PRKCH-208ENST00000553846 PDE6AP16499 860 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 COPB2P35606 906 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 RABGGTBP53611 331 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 LCORLQ8N3X6 602 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 CCDC8Q9H0W5 538 aaPredicted RBP11.01□□□□□ -0.65
PRKCH-208ENST00000553846 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
PRKCH-208ENST00000553846 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 ZNF318Q5VUA4 2279 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 CFAP54Q96N23 3096 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
PRKCH-208ENST00000553846 EEF2P13639 858 aaKnown RBP11□□□□□ -0.65
PRKCH-208ENST00000553846 ATP8B2P98198 1209 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 ACVR2BQ13705 512 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 CCDC144BQ3MJ40 725 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 OTOP2Q7RTS6 562 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 PCSK9Q8NBP7 692 aaKnown RBP11□□□□□ -0.65
PRKCH-208ENST00000553846 AGBL1Q96MI9 1066 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 TEX13BQ9BXU2 312 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 CD320Q9NPF0 282 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 CDKN2AIPQ9NXV6 580 aaPredicted RBP11□□□□□ -0.65
PRKCH-208ENST00000553846 HCN4Q9Y3Q4 1203 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 SCN5AQ14524 2016 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 ZBED9Q6R2W3 1325 aa11□□□□□ -0.65
PRKCH-208ENST00000553846 FGBP02675 491 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 AAK1Q2M2I8 961 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 TMEM31Q5JXX7 168 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 FAM83BQ5T0W9 1011 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 PPP2R2DQ66LE6 453 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 KRT40Q6A162 431 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms