RNA–Protein interactions for RNA: ENST00000553548.5

SRSF5-204, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-204ENST00000553548 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 CRHR2Q13324 411 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 ANKRD1Q15327 319 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 TAF1CQ15572 869 aaPredicted RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 ASPRV1Q53RT3 343 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 GPATCH4Q5T3I0 446 aaKnown RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 OTUD7BQ6GQQ9 843 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 SYNE3Q6ZMZ3 975 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 SRBD1Q8N5C6 995 aaKnown RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 JMYQ8N9B5 988 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 PRPF38AQ8NAV1 312 aaKnown RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 SLF1Q9BQI6 1058 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 NCOA5Q9HCD5 579 aaKnown RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 TXNRD2Q9NNW7 524 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 HOXC10Q9NYD6 342 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 RBPJLQ9UBG7 517 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 PPP1R9AQ9ULJ8 1098 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
SRSF5-204ENST00000553548 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 NAP1L2Q9ULW6 460 aaPredicted RBP11.53□□□□□ -0.56
SRSF5-204ENST00000553548 GOLGA8AA7E2F4 631 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 VWA5AO00534 786 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 TLR2O60603 784 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 DTNBO60941 627 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 ALDH1A1P00352 501 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.57
SRSF5-204ENST00000553548 RCAN1P53805 252 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 ST3GAL1Q11201 340 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 SCRN1Q12765 414 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 NTRK3Q16288 839 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 Q3C1V9 767 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 ADGRF4Q8IZF3 695 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 CCDC82Q8N4S0 544 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 REPS2Q8NFH8 660 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 CTCFLQ8NI51 663 aaPredicted RBP11.52□□□□□ -0.57
SRSF5-204ENST00000553548 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 RIOX1Q9H6W3 641 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 JMJD4Q9H9V9 463 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 VAT1LQ9HCJ6 419 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 BTBD7Q9P203 1132 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 CPA4Q9UI42 421 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 LIMCH1Q9UPQ0 1083 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.57
SRSF5-204ENST00000553548 MYPNQ86TC9 1320 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 NID2Q14112 1375 aa11.52□□□□□ -0.57
SRSF5-204ENST00000553548 PFKFB2O60825 505 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 BCRP11274 1271 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 KIF5BP33176 963 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 MAP2K1Q02750 393 aaPredicted RBP11.51□□□□□ -0.57
SRSF5-204ENST00000553548 IKQ13123 557 aaPredicted RBP11.51□□□□□ -0.57
SRSF5-204ENST00000553548 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 RTN1Q16799 776 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 SYDE2Q5VT97 1194 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 C17orf99Q6UX52 265 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 TMTC3Q6ZXV5 915 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 ANKRD13CQ8N6S4 541 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 NECAB1Q8N987 351 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
SRSF5-204ENST00000553548 MTMR8Q96EF0 704 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 PARK7Q99497 189 aaKnown RBP11.51□□□□□ -0.57
SRSF5-204ENST00000553548 SLC38A10Q9HBR0 1119 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 ZFYVE28Q9HCC9 887 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 PNMA3Q9UL41 463 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 ZNF536O15090 1300 aa11.51□□□□□ -0.57
SRSF5-204ENST00000553548 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
SRSF5-204ENST00000553548 SMCHD1A6NHR9 2005 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 ST18O60284 1047 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 CTDNEP1O95476 244 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 TAL1P17542 331 aaPredicted RBP11.5□□□□□ -0.57
SRSF5-204ENST00000553548 SMARCA1P28370 1054 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 IL27Q8NEV9 243 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 PIGSQ96S52 555 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 SLKQ9H2G2 1235 aaPredicted RBP11.5□□□□□ -0.57
SRSF5-204ENST00000553548 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
SRSF5-204ENST00000553548 RBM28Q9NW13 759 aaKnown RBP11.5□□□□□ -0.57
SRSF5-204ENST00000553548 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 ZNF214Q9UL59 606 aaPredicted RBP11.5□□□□□ -0.57
SRSF5-204ENST00000553548 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
SRSF5-204ENST00000553548 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 hCG_1642624A0A1W2PR95 340 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 PPP1R11O60927 126 aaPredicted RBP11.49□□□□□ -0.57
SRSF5-204ENST00000553548 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
SRSF5-204ENST00000553548 GNAQP50148 359 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 CAP1Q01518 475 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 PPP2R5BQ15173 497 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 CPXCR1Q8N123 301 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 PIBF1Q8WXW3 757 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 GTF3C6Q969F1 213 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 AGBL1Q96MI9 1066 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 LZTS2Q9BRK4 669 aa11.49□□□□□ -0.57
SRSF5-204ENST00000553548 PAGR1Q9BTK6 254 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms