RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 C11orf16Q9NQ32 467 aa9.66□□□□□ -0.86
PCNX1-203ENST00000553272 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
PCNX1-203ENST00000553272 PTPRSQ13332 1948 aa9.66□□□□□ -0.86
PCNX1-203ENST00000553272 MAGEB6P1A0A0J9YX57 407 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 MYADML2A6NDP7 307 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 VWA5AO00534 786 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 WDR46O15213 610 aaKnown RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 IPO8O15397 1037 aaKnown RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 BCAR3O75815 825 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 SNAI1O95863 264 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 BMP1P13497 986 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 CST5P28325 142 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 STAT3P40763 770 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 MRE11P49959 708 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 CCDC174Q6PII3 467 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 MAMDC4Q6UXC1 1216 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 MSL3Q8N5Y2 521 aaKnown RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 REPS2Q8NFH8 660 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 DCP1AQ9NPI6 582 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 FBXO28Q9NVF7 368 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 ZNF214Q9UL59 606 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-203ENST00000553272 FAM184BQ9ULE4 1060 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 CNPY2Q9Y2B0 182 aa9.65□□□□□ -0.86
PCNX1-203ENST00000553272 MROH7Q68CQ1 1323 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 DNAJC25-GNG10A0A024R161 153 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 ARVCFO00192 962 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 APBB1O00213 710 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 ADCY6O43306 1168 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 DUSP11O75319 330 aaKnown RBP9.64□□□□□ -0.87
PCNX1-203ENST00000553272 ACRP10323 421 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 CYP2D6P10635 497 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 AKR1B1P15121 316 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 ICA1Q05084 483 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 RAB30Q15771 203 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-203ENST00000553272 FAM126BQ8IXS8 530 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 TMEM199Q8N511 208 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 HERVK_113Q902F9 699 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 CLUAP1Q96AJ1 413 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 DYNLL2Q96FJ2 89 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 GLT1D1Q96MS3 346 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 CRNKL1Q9BZJ0 848 aaKnown RBP9.64□□□□□ -0.87
PCNX1-203ENST00000553272 CXXC1Q9P0U4 656 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-203ENST00000553272 SWAP70Q9UH65 585 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 MSRAQ9UJ68 235 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 ARIH1Q9Y4X5 557 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-203ENST00000553272 ZNF318Q5VUA4 2279 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 CACNA1AO00555 2505 aa9.64□□□□□ -0.87
PCNX1-203ENST00000553272 BAZ2AQ9UIF9 1905 aaKnown RBP9.63□□□□□ -0.87
PCNX1-203ENST00000553272 TCRBV5S4A2TA0A5A2 114 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 SMIM22K7EJ46 135 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 CD4P01730 458 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 ASGR1P07306 291 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 PDE6AP16499 860 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 COPB2P35606 906 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 SLC9C2Q5TAH2 1124 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 PSRC1Q6PGN9 363 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-203ENST00000553272 SDR42E1Q8WUS8 393 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 CCDC17Q96LX7 622 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 UPF3AQ9H1J1 476 aaKnown RBP9.63□□□□□ -0.87
PCNX1-203ENST00000553272 SH2D4AQ9H788 454 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 SLC28A3Q9HAS3 691 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 IL23AQ9NPF7 189 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
PCNX1-203ENST00000553272 YBX2Q9Y2T7 364 aaKnown RBP9.63□□□□□ -0.87
PCNX1-203ENST00000553272 A0A0U1RQG5 324 aaPredicted RBP9.62□□□□□ -0.87
PCNX1-203ENST00000553272 CTAGE5O15320 804 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 FGBP02675 491 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 C6orf222P0C671 652 aaPredicted RBP9.62□□□□□ -0.87
PCNX1-203ENST00000553272 EEF2P13639 858 aaKnown RBP9.62□□□□□ -0.87
PCNX1-203ENST00000553272 CYP2C18P33260 490 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 GJA9P57773 515 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 NKX3-2P78367 333 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 ACVR2BQ13705 512 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
PCNX1-203ENST00000553272 LCORLQ8N3X6 602 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 TMEM57Q8N5G2 664 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 PCSK9Q8NBP7 692 aaKnown RBP9.62□□□□□ -0.87
PCNX1-203ENST00000553272 PPP1R12CQ9BZL4 782 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 TSPYL2Q9H2G4 693 aaPredicted RBP9.62□□□□□ -0.87
PCNX1-203ENST00000553272 RIPK3Q9Y572 518 aa9.62□□□□□ -0.87
PCNX1-203ENST00000553272 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 PRKAB2O43741 272 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 MYOGP15173 224 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 CDK8P49336 464 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 RABGGTBP53611 331 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 TTF1Q15361 905 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-203ENST00000553272 CCDC144BQ3MJ40 725 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 GNASQ5JWF2 1037 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 FAM83BQ5T0W9 1011 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 C12orf60Q5U649 245 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 KRT40Q6A162 431 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
PCNX1-203ENST00000553272 SLC43A3Q8NBI5 491 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 FRAT1Q92837 279 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-203ENST00000553272 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
PCNX1-203ENST00000553272 VWCEQ96DN2 955 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms