RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 CCDC74AQ96AQ1 378 aa7.16□□□□□ -1.26
SMARCC2-213ENST00000552627 MEGF10Q96KG7 1140 aa7.16□□□□□ -1.26
SMARCC2-213ENST00000552627 IL16Q14005 1332 aa7.16□□□□□ -1.26
SMARCC2-213ENST00000552627 ZNF521Q96K83 1311 aa7.16□□□□□ -1.26
SMARCC2-213ENST00000552627 C10orf71Q711Q0 1435 aa7.16□□□□□ -1.26
SMARCC2-213ENST00000552627 A0A096LPE4 126 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 A0A1W2PPZ6 126 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 SOX1O00570 391 aaPredicted RBP7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 ADAM11O75078 769 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 WISP1O95388 367 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 H2AFB1P0C5Y9 115 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 H2AFB2P0C5Z0 115 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 KIF6Q6ZMV9 814 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 ACAD11Q709F0 780 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 WDR63Q8IWG1 891 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 DZIP1LQ8IYY4 767 aaKnown RBP7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 XAGE3Q8WTP9 111 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 FOXD4L4Q8WXT5 416 aaPredicted RBP7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 TCF12Q99081 682 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 EHD4Q9H223 541 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 NPHS2Q9NP85 383 aa7.15□□□□□ -1.26
SMARCC2-213ENST00000552627 PXDNLA1KZ92 1463 aa7.15□□□□□ -1.27
SMARCC2-213ENST00000552627 TNRC6CQ9HCJ0 1690 aaKnown RBP7.15□□□□□ -1.27
SMARCC2-213ENST00000552627 CACNA1SQ13698 1873 aa7.15□□□□□ -1.27
SMARCC2-213ENST00000552627 DYRK3O43781 588 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 SERPINB2P05120 415 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 ESRRAP11474 423 aaPredicted RBP7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 GLB1P16278 677 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 GPTP24298 496 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 BRCA1P38398 1863 aaKnown RBP7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 GRIA4P48058 902 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 NLRP12P59046 1061 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 PLCB3Q01970 1234 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 TWISTNBQ3B726 338 aaPredicted RBP7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 HGSNATQ68CP4 663 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 MAP3K15Q6ZN16 1313 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 KIAA1211Q6ZU35 1233 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 COPS6Q7L5N1 327 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 UBASH3BQ8TF42 649 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 PHAXQ9H814 394 aaKnown RBP7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 DDX21Q9NR30 783 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 DLEC1Q9Y238 1755 aa7.14□□□□□ -1.27
SMARCC2-213ENST00000552627 UBN2Q6ZU65 1347 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 A0A0G2JLW4 131 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 GADD45BO75293 160 aaPredicted RBP7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 HOXB7P09629 217 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 CHRNA5P30532 468 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 HNRNPUQ00839 825 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 SPRED3Q2MJR0 410 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 PRR5LQ6MZQ0 368 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 Q6ZS46 218 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 G2E3Q7L622 706 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 ZSCAN29Q8IWY8 852 aaPredicted RBP7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 SETDB2Q96T68 719 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 SOX17Q9H6I2 414 aaPredicted RBP7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 MYH16Q9H6N6 1097 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 DBF4Q9UBU7 674 aaPredicted RBP7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 NIP7Q9Y221 180 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
SMARCC2-213ENST00000552627 ATP10DQ9P241 1426 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 ABCC12Q96J65 1359 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 TREHO43280 583 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 DPEP1P16444 411 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 PCDH1Q08174 1060 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 SLFN5Q08AF3 891 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 DSC3Q14574 896 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 EPS8L3Q8TE67 593 aaKnown RBP7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 CEP41Q9BYV8 373 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 CLEC4MQ9H2X3 399 aaPredicted RBP7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 ZNF652Q9Y2D9 606 aa7.12□□□□□ -1.27
SMARCC2-213ENST00000552627 LAMB2P55268 1798 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 DDX60Q8IY21 1712 aaKnown RBP7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 ERVV-1B6SEH8 477 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 NPHP1O15259 732 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 VAMP4O75379 141 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 ITGB7P26010 798 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 GSTM4Q03013 218 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 CCDC30Q5VVM6 783 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 SUSD4Q5VX71 490 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 CLEC4GQ6UXB4 293 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 NBPF5PQ86XG9 351 aaPredicted RBP7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 CNBD1Q8NA66 436 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 UBL7Q96S82 380 aaPredicted RBP7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 HYPKQ9NX55 129 aa7.11□□□□□ -1.27
SMARCC2-213ENST00000552627 PNMA6FA0A0J9YX94 578 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 E9PSI1 815 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 KCNA3P22001 575 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 GPR162Q16538 588 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 ZNF423Q2M1K9 1284 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 C2CD5Q86YS7 1000 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 ZNF34Q8IZ26 560 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 SYNE4Q8N205 404 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 PLBD2Q8NHP8 589 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 ASB16Q96NS5 453 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 RUSC1Q9BVN2 902 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 BCL2L13Q9BXK5 485 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 STK31Q9BXU1 1019 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms