RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.32■□□□□ 0.84
CACNB3-222ENST00000552465 TEX13BQ9BXU2 312 aa20.32■□□□□ 0.84
CACNB3-222ENST00000552465 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
CACNB3-222ENST00000552465 ZHX1Q9UKY1 873 aaPredicted RBP20.32■□□□□ 0.84
CACNB3-222ENST00000552465 ELP1O95163 1332 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 DNAJC25-GNG10A0A024R161 153 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 MYADML2A6NDP7 307 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 TNFRSF10AO00220 468 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 CHGBP05060 677 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 PPIGQ13427 754 aaKnown RBP eCLIP20.31■□□□□ 0.84
CACNB3-222ENST00000552465 SNRNP48Q6IEG0 339 aaKnown RBP20.31■□□□□ 0.84
CACNB3-222ENST00000552465 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 PANK1Q8TE04 598 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 GLT1D1Q96MS3 346 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 SLF1Q9BQI6 1058 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.31■□□□□ 0.84
CACNB3-222ENST00000552465 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 RIPK3Q9Y572 518 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 SLC4A4Q9Y6R1 1079 aa20.31■□□□□ 0.84
CACNB3-222ENST00000552465 MROH7Q68CQ1 1323 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 PARP14Q460N5 1801 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 ATP5JP18859 108 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 CST5P28325 142 aaPredicted RBP20.3■□□□□ 0.84
CACNB3-222ENST00000552465 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
CACNB3-222ENST00000552465 UBE3CQ15386 1083 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 TMEM240Q5SV17 173 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 RASIP1Q5U651 963 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 CCDC174Q6PII3 467 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 NUP88Q99567 741 aaPredicted RBP20.3■□□□□ 0.84
CACNB3-222ENST00000552465 PBX4Q9BYU1 374 aa20.3■□□□□ 0.84
CACNB3-222ENST00000552465 VCANP13611 3396 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 ZBED9Q6R2W3 1325 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 GRXCR1A8MXD5 290 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 PBX2P40425 430 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 ACVR2BQ13705 512 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 ZNF467Q7Z7K2 595 aaPredicted RBP20.29■□□□□ 0.84
CACNB3-222ENST00000552465 PCSK9Q8NBP7 692 aaKnown RBP20.29■□□□□ 0.84
CACNB3-222ENST00000552465 VTI1AQ96AJ9 217 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 GAS2L1Q99501 681 aaPredicted RBP20.29■□□□□ 0.84
CACNB3-222ENST00000552465 HAUS7Q99871 368 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 EYSQ5T1H1 3165 aa20.29■□□□□ 0.84
CACNB3-222ENST00000552465 COL11A1P12107 1806 aaPredicted RBP20.28■□□□□ 0.84
CACNB3-222ENST00000552465 ATP2A1O14983 1001 aa20.28■□□□□ 0.84
CACNB3-222ENST00000552465 ASGR1P07306 291 aa20.28■□□□□ 0.84
CACNB3-222ENST00000552465 C6orf222P0C671 652 aaPredicted RBP20.28■□□□□ 0.84
CACNB3-222ENST00000552465 CSF2RAP15509 400 aa20.28■□□□□ 0.84
CACNB3-222ENST00000552465 CCDC129Q6ZRS4 1044 aa20.28■□□□□ 0.84
CACNB3-222ENST00000552465 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
CACNB3-222ENST00000552465 TMEM199Q8N511 208 aa20.28■□□□□ 0.84
CACNB3-222ENST00000552465 PRPF38AQ8NAV1 312 aaKnown RBP20.28■□□□□ 0.84
CACNB3-222ENST00000552465 PPM1EQ8WY54 764 aa20.28■□□□□ 0.84
CACNB3-222ENST00000552465 UPF3AQ9H1J1 476 aaKnown RBP20.28■□□□□ 0.84
CACNB3-222ENST00000552465 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.28■□□□□ 0.84
CACNB3-222ENST00000552465 NYAP2Q9P242 653 aa20.28■□□□□ 0.84
CACNB3-222ENST00000552465 SPTBN5Q9NRC6 3674 aaKnown RBP20.27■□□□□ 0.84
CACNB3-222ENST00000552465 F5H6K3 240 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 ARVCFO00192 962 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 ADCY6O43306 1168 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 RAB11FIP3O75154 756 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 SLC4A3P48751 1232 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 GJA9P57773 515 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 KLRC3Q07444 240 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 AKNAD1Q5T1N1 836 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 ZNF365Q70YC5 407 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 CPXCR1Q8N123 301 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 ATXN2LQ8WWM7 1075 aaKnown RBP20.27■□□□□ 0.84
CACNB3-222ENST00000552465 PUS7LQ9H0K6 701 aaKnown RBP20.27■□□□□ 0.84
CACNB3-222ENST00000552465 ABHD16BQ9H3Z7 469 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 PRDM12Q9H4Q4 367 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 SPC25Q9HBM1 224 aa20.27■□□□□ 0.84
CACNB3-222ENST00000552465 PLXNA1Q9UIW2 1896 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 TTC28Q96AY4 2481 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 A0A0U1RQG5 324 aaPredicted RBP20.26■□□□□ 0.83
CACNB3-222ENST00000552465 ZBED4O75132 1171 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 HMMRO75330 724 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 NDUFB10O96000 172 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 ACRP10323 421 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 COL9A1P20849 921 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 CCDC144BQ3MJ40 725 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 GNASQ5JWF2 1037 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.26■□□□□ 0.83
CACNB3-222ENST00000552465 SIRT2Q8IXJ6 389 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 FAM126BQ8IXS8 530 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 FGD4Q96M96 766 aa20.26■□□□□ 0.83
CACNB3-222ENST00000552465 ARPP21Q9UBL0 812 aaPredicted RBP20.26■□□□□ 0.83
CACNB3-222ENST00000552465 RASA1P20936 1047 aa20.25■□□□□ 0.83
CACNB3-222ENST00000552465 SBK1Q52WX2 424 aa20.25■□□□□ 0.83
CACNB3-222ENST00000552465 PSRC1Q6PGN9 363 aaPredicted RBP20.25■□□□□ 0.83
CACNB3-222ENST00000552465 PPP1R12CQ9BZL4 782 aa20.25■□□□□ 0.83
CACNB3-222ENST00000552465 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
CACNB3-222ENST00000552465 BAZ2AQ9UIF9 1905 aaKnown RBP20.25■□□□□ 0.83
CACNB3-222ENST00000552465 PRUNE2Q8WUY3 3088 aa20.25■□□□□ 0.83
CACNB3-222ENST00000552465 MYH8P13535 1937 aa20.24■□□□□ 0.83
CACNB3-222ENST00000552465 CTAGE5O15320 804 aa20.24■□□□□ 0.83
CACNB3-222ENST00000552465 TLR3O15455 904 aaKnown RBP20.24■□□□□ 0.83
CACNB3-222ENST00000552465 NKX3-2P78367 333 aa20.24■□□□□ 0.83
CACNB3-222ENST00000552465 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
CACNB3-222ENST00000552465 ARMCX2Q7L311 632 aa20.24■□□□□ 0.83
CACNB3-222ENST00000552465 ANKRD35Q8N283 1001 aa20.24■□□□□ 0.83
CACNB3-222ENST00000552465 ASB2Q96Q27 587 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms