RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 PCDH10Q9P2E7 1040 aa24.05■■□□□ 1.44
SLC48A1-208ENST00000551301 RBM27Q9P2N5 1060 aaKnown RBP24.05■■□□□ 1.44
SLC48A1-208ENST00000551301 ATP2A1O14983 1001 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 SEPT4O43236 478 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 PGK2P07205 417 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 COL6A1P12109 1028 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 SLC1A4P43007 532 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 NUCB1Q02818 461 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 FAM227BQ96M60 508 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 FBXO40Q9UH90 709 aa24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.04■■□□□ 1.44
SLC48A1-208ENST00000551301 KBTBD13C9JR72 458 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 DNM1LO00429 736 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 IGHA2P01877 340 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 FXR1P51114 621 aaKnown RBP eCLIP24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 STAT2P52630 851 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 OAZ1P54368 228 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 VPS53Q5VIR6 699 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 FAM160B2Q86V87 743 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 TRPV1Q8NER1 839 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 CNPY2Q9Y2B0 182 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 ZNFX1Q9P2E3 1918 aaKnown RBP24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 PFASO15067 1338 aa24.03■■□□□ 1.44
SLC48A1-208ENST00000551301 A0A0D9SFI3 127 aa24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 A0A1W2PPC1 479 aa24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 TMEM232C9JQI7 657 aa24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 ORC4O43929 436 aa24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 NMIQ13287 307 aaPredicted RBP24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 GMCL1Q96IK5 515 aa24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 TINF2Q9BSI4 451 aa24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 SENP6Q9GZR1 1112 aaPredicted RBP24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 SLC38A10Q9HBR0 1119 aa24.02■■□□□ 1.44
SLC48A1-208ENST00000551301 HIP1O00291 1037 aa24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 FOXP2O15409 715 aa24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 IGHDP01880 384 aa24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 FGAP02671 866 aa24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 MYCNP04198 464 aaPredicted RBP24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 ZNF792Q3KQV3 632 aa24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 MSL3Q8N5Y2 521 aaKnown RBP24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 OSBPL3Q9H4L5 887 aa24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 ZMYND8Q9ULU4 1186 aaPredicted RBP24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 CCDC171Q6TFL3 1326 aa24.01■■□□□ 1.43
SLC48A1-208ENST00000551301 HSPD1P10809 573 aaKnown RBP24■■□□□ 1.43
SLC48A1-208ENST00000551301 RRP12Q5JTH9 1297 aaKnown RBP24■■□□□ 1.43
SLC48A1-208ENST00000551301 PLEKHM2Q8IWE5 1019 aa24■■□□□ 1.43
SLC48A1-208ENST00000551301 ANKRD35Q8N283 1001 aa24■■□□□ 1.43
SLC48A1-208ENST00000551301 CHST13Q8NET6 341 aa24■■□□□ 1.43
SLC48A1-208ENST00000551301 STAG1Q8WVM7 1258 aa24■■□□□ 1.43
SLC48A1-208ENST00000551301 RAVER2Q9HCJ3 691 aaKnown RBP24■■□□□ 1.43
SLC48A1-208ENST00000551301 DIAPH3Q9NSV4 1193 aa24■■□□□ 1.43
SLC48A1-208ENST00000551301 SUPT16HQ9Y5B9 1047 aaKnown RBP24■■□□□ 1.43
SLC48A1-208ENST00000551301 ZMYM6O95789 1325 aa24■■□□□ 1.43
SLC48A1-208ENST00000551301 ALPK3Q96L96 1907 aa24■■□□□ 1.43
SLC48A1-208ENST00000551301 FRMPD3Q5JV73 1810 aa23.99■■□□□ 1.43
SLC48A1-208ENST00000551301 RARBP10826 455 aa23.99■■□□□ 1.43
SLC48A1-208ENST00000551301 PCP11498 1178 aaKnown RBP23.99■■□□□ 1.43
SLC48A1-208ENST00000551301 SDSP20132 328 aa23.99■■□□□ 1.43
SLC48A1-208ENST00000551301 MCCP23508 829 aa23.99■■□□□ 1.43
SLC48A1-208ENST00000551301 PRAMEF19Q5SWL8 479 aa23.99■■□□□ 1.43
SLC48A1-208ENST00000551301 GJC2Q5T442 439 aaPredicted RBP23.98■■□□□ 1.43
SLC48A1-208ENST00000551301 RCSD1Q6JBY9 416 aa23.98■■□□□ 1.43
SLC48A1-208ENST00000551301 MFSD6Q6ZSS7 791 aa23.98■■□□□ 1.43
SLC48A1-208ENST00000551301 PRO3102Q9H379 93 aa23.98■■□□□ 1.43
SLC48A1-208ENST00000551301 RNF41Q9H4P4 317 aaPredicted RBP23.98■■□□□ 1.43
SLC48A1-208ENST00000551301 INCENPQ9NQS7 918 aa23.98■■□□□ 1.43
SLC48A1-208ENST00000551301 FGRP09769 529 aa23.97■■□□□ 1.43
SLC48A1-208ENST00000551301 SYN1P17600 705 aa23.97■■□□□ 1.43
SLC48A1-208ENST00000551301 LRRC26Q2I0M4 334 aa23.97■■□□□ 1.43
SLC48A1-208ENST00000551301 ANO1Q5XXA6 986 aa23.97■■□□□ 1.43
SLC48A1-208ENST00000551301 IL17RBQ9NRM6 502 aa23.97■■□□□ 1.43
SLC48A1-208ENST00000551301 PRKAG2Q9UGJ0 569 aa23.97■■□□□ 1.43
SLC48A1-208ENST00000551301 RIPK3Q9Y572 518 aa23.97■■□□□ 1.43
SLC48A1-208ENST00000551301 PLXNA1Q9UIW2 1896 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 NMT2O60551 498 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 PLA2G6O60733 806 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 AKR1A1P14550 325 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 CCDC96Q2M329 555 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 RNF180Q86T96 592 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 ZNF589Q86UQ0 364 aaPredicted RBP23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 DCAF4Q8WV16 495 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 CHMP4CQ96CF2 233 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 XPNPEP3Q9NQH7 507 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 MTMR7Q9Y216 660 aa23.96■■□□□ 1.43
SLC48A1-208ENST00000551301 SYNGAP1Q96PV0 1343 aa23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 TOP1P11387 765 aaKnown RBP23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 BMP8BP34820 402 aa23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 ATN1P54259 1190 aaPredicted RBP23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 TKFCQ3LXA3 575 aa23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 KCTD1Q719H9 257 aa23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 ZNF467Q7Z7K2 595 aaPredicted RBP23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 ACAD9Q9H845 621 aa23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 HOMER2Q9NSB8 354 aa23.95■■□□□ 1.42
SLC48A1-208ENST00000551301 RANBP2P49792 3224 aaKnown RBP23.94■■□□□ 1.42
SLC48A1-208ENST00000551301 NT5C2P49902 561 aa23.94■■□□□ 1.42
SLC48A1-208ENST00000551301 HAND2P61296 217 aa23.94■■□□□ 1.42
SLC48A1-208ENST00000551301 AKNAD1Q5T1N1 836 aa23.94■■□□□ 1.42
SLC48A1-208ENST00000551301 CWC27Q6UX04 472 aaKnown RBP23.94■■□□□ 1.42
SLC48A1-208ENST00000551301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.94■■□□□ 1.42
SLC48A1-208ENST00000551301 GDF15Q99988 308 aa23.94■■□□□ 1.42
SLC48A1-208ENST00000551301 LBHD1Q9BQE6 289 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms