RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SMCHD1A6NHR9 2005 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 SLC3A2P08195 630 aaKnown RBP15.97■□□□□ 0.15
GCN1-206ENST00000549815 FGRP09769 529 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 NOVP48745 357 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 CTDSPL2Q05D32 466 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 ANO1Q5XXA6 986 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 SLFN13Q68D06 897 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
GCN1-206ENST00000549815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.97■□□□□ 0.15
GCN1-206ENST00000549815 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 FAM227BQ96M60 508 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 TINF2Q9BSI4 451 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 SENP6Q9GZR1 1112 aaPredicted RBP15.97■□□□□ 0.15
GCN1-206ENST00000549815 SLC38A10Q9HBR0 1119 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 IL17RBQ9NRM6 502 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 FEM1BQ9UK73 627 aa15.97■□□□□ 0.15
GCN1-206ENST00000549815 DNAJC25-GNG10A0A024R161 153 aa15.96■□□□□ 0.15
GCN1-206ENST00000549815 A0A0D9SFI3 127 aa15.96■□□□□ 0.15
GCN1-206ENST00000549815 IGHDP01880 384 aa15.96■□□□□ 0.15
GCN1-206ENST00000549815 ALX1Q15699 326 aa15.96■□□□□ 0.15
GCN1-206ENST00000549815 GJC2Q5T442 439 aaPredicted RBP15.96■□□□□ 0.15
GCN1-206ENST00000549815 KIFC2Q96AC6 838 aa15.96■□□□□ 0.15
GCN1-206ENST00000549815 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
GCN1-206ENST00000549815 NRBP1Q9UHY1 535 aa15.96■□□□□ 0.15
GCN1-206ENST00000549815 SOX1O00570 391 aaPredicted RBP15.95■□□□□ 0.14
GCN1-206ENST00000549815 BMP3P12645 472 aa15.95■□□□□ 0.14
GCN1-206ENST00000549815 MAGEA10P43363 369 aaPredicted RBP15.95■□□□□ 0.14
GCN1-206ENST00000549815 MCMDC2Q4G0Z9 681 aa15.95■□□□□ 0.14
GCN1-206ENST00000549815 GMCL1Q96IK5 515 aa15.95■□□□□ 0.14
GCN1-206ENST00000549815 ORC4O43929 436 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 NMT2O60551 498 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 ZBED4O75132 1171 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 FGAP02671 866 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 ZNF865P0CJ78 1059 aaPredicted RBP15.94■□□□□ 0.14
GCN1-206ENST00000549815 TAL1P17542 331 aaPredicted RBP15.94■□□□□ 0.14
GCN1-206ENST00000549815 OAZ1P54368 228 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 ZNF589Q86UQ0 364 aaPredicted RBP15.94■□□□□ 0.14
GCN1-206ENST00000549815 CPXCR1Q8N123 301 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 ARRDC4Q8NCT1 418 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 EXOC6Q8TAG9 804 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 FGD4Q96M96 766 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
GCN1-206ENST00000549815 RAVER2Q9HCJ3 691 aaKnown RBP15.94■□□□□ 0.14
GCN1-206ENST00000549815 ZMYM6O95789 1325 aa15.94■□□□□ 0.14
GCN1-206ENST00000549815 TSPY2A6NKD2 308 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 TMEM232C9JQI7 657 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 PLA2G6O60733 806 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 HSPD1P10809 573 aaKnown RBP15.93■□□□□ 0.14
GCN1-206ENST00000549815 ATN1P54259 1190 aaPredicted RBP15.93■□□□□ 0.14
GCN1-206ENST00000549815 NMIQ13287 307 aaPredicted RBP15.93■□□□□ 0.14
GCN1-206ENST00000549815 LRRC41Q15345 812 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 B4GALNT3Q6L9W6 998 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 MAMDC4Q6UXC1 1216 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 CHD1LQ86WJ1 897 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 PLEKHM2Q8IWE5 1019 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 MSL3Q8N5Y2 521 aaKnown RBP15.93■□□□□ 0.14
GCN1-206ENST00000549815 OSBPL3Q9H4L5 887 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 ZNF536O15090 1300 aa15.93■□□□□ 0.14
GCN1-206ENST00000549815 SNAI1O95863 264 aaPredicted RBP15.92■□□□□ 0.14
GCN1-206ENST00000549815 FDX1P10109 184 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 MCCP23508 829 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 STAT2P52630 851 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 NUCB1Q02818 461 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 SNX17Q15036 470 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 SLC39A5Q6ZMH5 540 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 RASGRP2Q7LDG7 609 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 ZNF467Q7Z7K2 595 aaPredicted RBP15.92■□□□□ 0.14
GCN1-206ENST00000549815 CHST13Q8NET6 341 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 STAG1Q8WVM7 1258 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 STX8Q9UNK0 236 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 SYNGAP1Q96PV0 1343 aa15.92■□□□□ 0.14
GCN1-206ENST00000549815 LTBP2Q14767 1821 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 TRIM6-TRIM34B2RNG4 842 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 KBTBD13C9JR72 458 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 SLC1A4P43007 532 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 RTP1P59025 263 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 RCSD1Q6JBY9 416 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 FAM160B2Q86V87 743 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 DDX11Q96FC9 970 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 LRCH3Q96II8 777 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 XPNPEP3Q9NQH7 507 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 FBXO40Q9UH90 709 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 MCM3APO60318 1980 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 CCDC171Q6TFL3 1326 aa15.91■□□□□ 0.14
GCN1-206ENST00000549815 RANBP6O60518 1105 aaKnown RBP15.9■□□□□ 0.14
GCN1-206ENST00000549815 ADAMTS4O75173 837 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 RARBP10826 455 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 AKR1A1P14550 325 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 SDSP20132 328 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 SLC4A3P48751 1232 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 LRIT3Q3SXY7 679 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 C1orf53Q5VUE5 145 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 KCTD1Q719H9 257 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 TDHQ8IZJ6 230 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 CHURC1Q8WUH1 139 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 RILPL2Q969X0 211 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 LENG1Q96BZ8 264 aaPredicted RBP15.9■□□□□ 0.14
GCN1-206ENST00000549815 TCP11L1Q9NUJ3 509 aa15.9■□□□□ 0.14
GCN1-206ENST00000549815 PHF24Q9UPV7 400 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms