RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
CNOT2-220ENST00000549750 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
CNOT2-220ENST00000549750 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 F5H6K3 240 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 KLRC3Q07444 240 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 PLS1Q14651 629 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 FAM83BQ5T0W9 1011 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 MAML3Q96JK9 1138 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 FSD1Q9BTV5 496 aa16.31■□□□□ 0.2
CNOT2-220ENST00000549750 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
CNOT2-220ENST00000549750 BDP1A6H8Y1 2624 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 ATP2A1O14983 1001 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 SEPT4O43236 478 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 NDUFB10O96000 172 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 STAT3P40763 770 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 AAMPQ13685 434 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 SLC39A5Q6ZMH5 540 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 ZNF444Q8N0Y2 327 aaPredicted RBP16.3■□□□□ 0.2
CNOT2-220ENST00000549750 ARRDC4Q8NCT1 418 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
CNOT2-220ENST00000549750 SLF1Q9BQI6 1058 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 MTMR4Q9NYA4 1195 aa16.3■□□□□ 0.2
CNOT2-220ENST00000549750 APPP05067 770 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.29■□□□□ 0.2
CNOT2-220ENST00000549750 USP38Q8NB14 1042 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 GMCL1P1Q8NEA9 526 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 NEDD1Q8NHV4 660 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 CEP95Q96GE4 821 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 MMP19Q99542 508 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 TEX13BQ9BXU2 312 aa16.29■□□□□ 0.2
CNOT2-220ENST00000549750 FOXP2O15409 715 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 TTLL1O95922 423 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
CNOT2-220ENST00000549750 PDE4BQ07343 736 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 PPARAQ07869 468 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 KCTD2Q14681 263 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 GJC2Q5T442 439 aaPredicted RBP16.28■□□□□ 0.2
CNOT2-220ENST00000549750 PRPF38AQ8NAV1 312 aaKnown RBP16.28■□□□□ 0.2
CNOT2-220ENST00000549750 NAPBQ9H115 298 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 LTBP2Q14767 1821 aa16.28■□□□□ 0.2
CNOT2-220ENST00000549750 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
CNOT2-220ENST00000549750 PRDM1O75626 825 aa16.27■□□□□ 0.2
CNOT2-220ENST00000549750 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
CNOT2-220ENST00000549750 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
CNOT2-220ENST00000549750 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
CNOT2-220ENST00000549750 EVI5LQ96CN4 794 aa16.27■□□□□ 0.2
CNOT2-220ENST00000549750 RNPC3Q96LT9 517 aaKnown RBP16.27■□□□□ 0.2
CNOT2-220ENST00000549750 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
CNOT2-220ENST00000549750 PDLIM7Q9NR12 457 aa16.27■□□□□ 0.2
CNOT2-220ENST00000549750 CLIP2Q9UDT6 1046 aa16.27■□□□□ 0.2
CNOT2-220ENST00000549750 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 OAZ1P54368 228 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 PDE1AP54750 535 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 SNX17Q15036 470 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 TRIM60Q495X7 471 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 PPP4R3BQ5MIZ7 849 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
CNOT2-220ENST00000549750 TRIM43Q96BQ3 446 aaPredicted RBP16.26■□□□□ 0.19
CNOT2-220ENST00000549750 TINF2Q9BSI4 451 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
CNOT2-220ENST00000549750 FEM1BQ9UK73 627 aa16.26■□□□□ 0.19
CNOT2-220ENST00000549750 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
CNOT2-220ENST00000549750 SMCHD1A6NHR9 2005 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 DNAJC25-GNG10A0A024R161 153 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 RAD21O60216 631 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 TSPY3P0CV98 308 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 TSPY8P0CW00 308 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 FDX1P10109 184 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 SNRNP48Q6IEG0 339 aaKnown RBP16.25■□□□□ 0.19
CNOT2-220ENST00000549750 SH3RF1Q7Z6J0 888 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 MYO9BQ13459 2157 aa16.25■□□□□ 0.19
CNOT2-220ENST00000549750 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.24■□□□□ 0.19
CNOT2-220ENST00000549750 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.24■□□□□ 0.19
CNOT2-220ENST00000549750 PGK2P07205 417 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 FGRP09769 529 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 NOVP48745 357 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 TFAP4Q01664 338 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 ALX1Q15699 326 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
CNOT2-220ENST00000549750 LRRC47Q8N1G4 583 aaKnown RBP16.24■□□□□ 0.19
CNOT2-220ENST00000549750 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 ASB2Q96Q27 587 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 RIPK3Q9Y572 518 aa16.24■□□□□ 0.19
CNOT2-220ENST00000549750 SYNGAP1Q96PV0 1343 aa16.23■□□□□ 0.19
CNOT2-220ENST00000549750 PLA2G6O60733 806 aa16.23■□□□□ 0.19
CNOT2-220ENST00000549750 ZBED4O75132 1171 aa16.23■□□□□ 0.19
CNOT2-220ENST00000549750 ZNF865P0CJ78 1059 aaPredicted RBP16.23■□□□□ 0.19
CNOT2-220ENST00000549750 BMP3P12645 472 aa16.23■□□□□ 0.19
CNOT2-220ENST00000549750 DNAJB2P25686 324 aa16.23■□□□□ 0.19
CNOT2-220ENST00000549750 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms