RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 TINF2Q9BSI4 451 aa18.73■□□□□ 0.59
CDK4-206ENST00000549606 UBE2OQ9C0C9 1292 aaKnown RBP18.73■□□□□ 0.59
CDK4-206ENST00000549606 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
CDK4-206ENST00000549606 RIPK3Q9Y572 518 aa18.73■□□□□ 0.59
CDK4-206ENST00000549606 PDE1AP54750 535 aa18.72■□□□□ 0.59
CDK4-206ENST00000549606 MDM2Q00987 491 aaPredicted RBP18.72■□□□□ 0.59
CDK4-206ENST00000549606 CTDSPL2Q05D32 466 aa18.72■□□□□ 0.59
CDK4-206ENST00000549606 SLFN13Q68D06 897 aa18.72■□□□□ 0.59
CDK4-206ENST00000549606 GMCL1P1Q8NEA9 526 aa18.72■□□□□ 0.59
CDK4-206ENST00000549606 CHMP4CQ96CF2 233 aa18.72■□□□□ 0.59
CDK4-206ENST00000549606 DDX11Q96FC9 970 aa18.72■□□□□ 0.59
CDK4-206ENST00000549606 RAVER2Q9HCJ3 691 aaKnown RBP18.72■□□□□ 0.59
CDK4-206ENST00000549606 FEM1BQ9UK73 627 aa18.72■□□□□ 0.59
CDK4-206ENST00000549606 DIS3Q9Y2L1 958 aaKnown RBP18.72■□□□□ 0.59
CDK4-206ENST00000549606 SMCHD1A6NHR9 2005 aa18.71■□□□□ 0.59
CDK4-206ENST00000549606 PLIN4Q96Q06 1357 aa18.71■□□□□ 0.59
CDK4-206ENST00000549606 BMP3P12645 472 aa18.71■□□□□ 0.59
CDK4-206ENST00000549606 INCENPQ9NQS7 918 aa18.71■□□□□ 0.59
CDK4-206ENST00000549606 SYNPO2Q9UMS6 1093 aa18.71■□□□□ 0.59
CDK4-206ENST00000549606 LAMA3Q16787 3333 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 TSPY2A6NKD2 308 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 FOXP2O15409 715 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 RARBP10826 455 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 TAL1P17542 331 aaPredicted RBP18.7■□□□□ 0.58
CDK4-206ENST00000549606 RTP1P59025 263 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 LRRC41Q15345 812 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 VPS53Q5VIR6 699 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 SLC39A5Q6ZMH5 540 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 TDHQ8IZJ6 230 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 FERMT2Q96AC1 680 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 SLC38A10Q9HBR0 1119 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 XPNPEP3Q9NQH7 507 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 NRBP1Q9UHY1 535 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
CDK4-206ENST00000549606 ATP2A1O14983 1001 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 ADCYAP1R1P41586 468 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 IKQ13123 557 aaPredicted RBP18.69■□□□□ 0.58
CDK4-206ENST00000549606 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 LNPKQ9C0E8 428 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 HELLSQ9NRZ9 838 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 PRKAG2Q9UGJ0 569 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 STX8Q9UNK0 236 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 CNPY2Q9Y2B0 182 aa18.69■□□□□ 0.58
CDK4-206ENST00000549606 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
CDK4-206ENST00000549606 TMEM232C9JQI7 657 aa18.68■□□□□ 0.58
CDK4-206ENST00000549606 ANKRD35Q8N283 1001 aa18.68■□□□□ 0.58
CDK4-206ENST00000549606 FAM227BQ96M60 508 aa18.68■□□□□ 0.58
CDK4-206ENST00000549606 LBHD1Q9BQE6 289 aaPredicted RBP18.68■□□□□ 0.58
CDK4-206ENST00000549606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
CDK4-206ENST00000549606 RANBP6O60518 1105 aaKnown RBP18.67■□□□□ 0.58
CDK4-206ENST00000549606 NMT2O60551 498 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 PGK1P00558 417 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 ZNF865P0CJ78 1059 aaPredicted RBP18.67■□□□□ 0.58
CDK4-206ENST00000549606 MCCP23508 829 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 SLC1A4P43007 532 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 STAT2P52630 851 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 PPP4R3BQ5MIZ7 849 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 RWDD1Q9H446 243 aaPredicted RBP18.67■□□□□ 0.58
CDK4-206ENST00000549606 IL17RBQ9NRM6 502 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 TOMM22Q9NS69 142 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 HOMER2Q9NSB8 354 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 MTMR7Q9Y216 660 aa18.67■□□□□ 0.58
CDK4-206ENST00000549606 DNAJC25-GNG10A0A024R161 153 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 A0A0D9SFI3 127 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 AKR1A1P14550 325 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 OAZ1P54368 228 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 TRIM60Q495X7 471 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 MCMDC2Q4G0Z9 681 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 RNF180Q86T96 592 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
CDK4-206ENST00000549606 CHST13Q8NET6 341 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 CHURC1Q8WUH1 139 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 STAG1Q8WVM7 1258 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 RILPL2Q969X0 211 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 GMCL1Q96IK5 515 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 FBXO40Q9UH90 709 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 ANAPC4Q9UJX5 808 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 TACC3Q9Y6A5 838 aa18.66■□□□□ 0.58
CDK4-206ENST00000549606 SNAI1O95863 264 aaPredicted RBP18.65■□□□□ 0.58
CDK4-206ENST00000549606 FDX1P10109 184 aa18.65■□□□□ 0.58
CDK4-206ENST00000549606 NMIQ13287 307 aaPredicted RBP18.65■□□□□ 0.58
CDK4-206ENST00000549606 AAMPQ13685 434 aa18.65■□□□□ 0.58
CDK4-206ENST00000549606 LRIT3Q3SXY7 679 aa18.65■□□□□ 0.58
CDK4-206ENST00000549606 RRP12Q5JTH9 1297 aaKnown RBP18.65■□□□□ 0.58
CDK4-206ENST00000549606 KCTD1Q719H9 257 aa18.65■□□□□ 0.58
CDK4-206ENST00000549606 FAM160B2Q86V87 743 aa18.65■□□□□ 0.58
CDK4-206ENST00000549606 LENG1Q96BZ8 264 aaPredicted RBP18.65■□□□□ 0.58
CDK4-206ENST00000549606 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
CDK4-206ENST00000549606 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
CDK4-206ENST00000549606 SYNGAP1Q96PV0 1343 aa18.65■□□□□ 0.58
CDK4-206ENST00000549606 FGAP02671 866 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 ALX1Q15699 326 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 RCSD1Q6JBY9 416 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 MAMDC4Q6UXC1 1216 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 AGBL1Q96MI9 1066 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 FAM184BQ9ULE4 1060 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 PHF24Q9UPV7 400 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 LTBP2Q14767 1821 aa18.64■□□□□ 0.57
CDK4-206ENST00000549606 HSPD1P10809 573 aaKnown RBP18.63■□□□□ 0.57
CDK4-206ENST00000549606 SNAP25P60880 206 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms