RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 NUP133Q8WUM0 1156 aa18.62■□□□□ 0.57
TCHP-208ENST00000549550 TOX2Q96NM4 488 aa18.62■□□□□ 0.57
TCHP-208ENST00000549550 RWDD1Q9H446 243 aaPredicted RBP18.62■□□□□ 0.57
TCHP-208ENST00000549550 ZNF576Q9H609 170 aa18.62■□□□□ 0.57
TCHP-208ENST00000549550 ATP8A2Q9NTI2 1148 aa18.62■□□□□ 0.57
TCHP-208ENST00000549550 PPP1R9AQ9ULJ8 1098 aa18.62■□□□□ 0.57
TCHP-208ENST00000549550 CNPY2Q9Y2B0 182 aa18.62■□□□□ 0.57
TCHP-208ENST00000549550 MYH4Q9Y623 1939 aa18.62■□□□□ 0.57
TCHP-208ENST00000549550 MBD4O95243 580 aa18.61■□□□□ 0.57
TCHP-208ENST00000549550 SLFNL1Q499Z3 407 aa18.61■□□□□ 0.57
TCHP-208ENST00000549550 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
TCHP-208ENST00000549550 TIFAQ96CG3 184 aa18.61■□□□□ 0.57
TCHP-208ENST00000549550 GOPCQ9HD26 462 aa18.61■□□□□ 0.57
TCHP-208ENST00000549550 CHD7Q9P2D1 2997 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 RAD21O60216 631 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 TIMP1P01033 207 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 COPB2P35606 906 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 HDAC1Q13547 482 aaPredicted RBP18.6■□□□□ 0.57
TCHP-208ENST00000549550 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 FAM83BQ5T0W9 1011 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 C16orf86Q6ZW13 317 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 AMOTL1Q8IY63 956 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 REPS2Q8NFH8 660 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.6■□□□□ 0.57
TCHP-208ENST00000549550 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.6■□□□□ 0.57
TCHP-208ENST00000549550 KANSL2Q9H9L4 492 aa18.6■□□□□ 0.57
TCHP-208ENST00000549550 MOXD2PA6NHM9 499 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 USP17L12C9JPN9 530 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 USP17L21D6R901 530 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 APBB1O00213 710 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 TNFRSF10AO00220 468 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 KCNA10Q16322 511 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 CLASRPQ8N2M8 674 aaKnown RBP18.59■□□□□ 0.57
TCHP-208ENST00000549550 KLHDC9Q8NEP7 349 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 BCL11AQ9H165 835 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 TBX21Q9UL17 535 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 FAM184BQ9ULE4 1060 aa18.59■□□□□ 0.57
TCHP-208ENST00000549550 SYNGAP1Q96PV0 1343 aa18.58■□□□□ 0.57
TCHP-208ENST00000549550 MYADML2A6NDP7 307 aa18.58■□□□□ 0.56
TCHP-208ENST00000549550 SNAI1O95863 264 aaPredicted RBP18.58■□□□□ 0.56
TCHP-208ENST00000549550 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.56
TCHP-208ENST00000549550 ADD2P35612 726 aa18.58■□□□□ 0.56
TCHP-208ENST00000549550 CCSAPQ6IQ19 270 aaPredicted RBP18.58■□□□□ 0.56
TCHP-208ENST00000549550 MFSD5Q6N075 450 aa18.58■□□□□ 0.56
TCHP-208ENST00000549550 MSL3Q8N5Y2 521 aaKnown RBP18.58■□□□□ 0.56
TCHP-208ENST00000549550 ZHX1Q9UKY1 873 aaPredicted RBP18.58■□□□□ 0.56
TCHP-208ENST00000549550 BDP1A6H8Y1 2624 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 MROH7Q68CQ1 1323 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 PBX2P40425 430 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 SNRNP48Q6IEG0 339 aaKnown RBP18.57■□□□□ 0.56
TCHP-208ENST00000549550 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 PPM1EQ8WY54 764 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 DDX11Q96FC9 970 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 GLT1D1Q96MS3 346 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 GAS2L1Q99501 681 aaPredicted RBP18.57■□□□□ 0.56
TCHP-208ENST00000549550 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 PAG1Q9NWQ8 432 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 NCOR1O75376 2440 aa18.57■□□□□ 0.56
TCHP-208ENST00000549550 ELP1O95163 1332 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 GRXCR1A8MXD5 290 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 DUSP11O75319 330 aaKnown RBP18.56■□□□□ 0.56
TCHP-208ENST00000549550 COL9A1P20849 921 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 IRX5P78411 483 aaPredicted RBP18.56■□□□□ 0.56
TCHP-208ENST00000549550 PPIGQ13427 754 aaKnown RBP eCLIP18.56■□□□□ 0.56
TCHP-208ENST00000549550 TMEM240Q5SV17 173 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 CCDC174Q6PII3 467 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 MAMDC4Q6UXC1 1216 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 C16orf59Q7L2K0 433 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 KIF1BPQ96EK5 621 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 NUP88Q99567 741 aaPredicted RBP18.56■□□□□ 0.56
TCHP-208ENST00000549550 SLF1Q9BQI6 1058 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 PBX4Q9BYU1 374 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.56■□□□□ 0.56
TCHP-208ENST00000549550 RIPK3Q9Y572 518 aa18.56■□□□□ 0.56
TCHP-208ENST00000549550 DNAJC25-GNG10A0A024R161 153 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 ADCY6O43306 1168 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 CHGBP05060 677 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 C6orf222P0C671 652 aaPredicted RBP18.55■□□□□ 0.56
TCHP-208ENST00000549550 CSF2RAP15509 400 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 CST5P28325 142 aaPredicted RBP18.55■□□□□ 0.56
TCHP-208ENST00000549550 CDK7P50613 346 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 VTI1AQ96AJ9 217 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 BOLA2Q9H3K6 86 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 PRDM12Q9H4Q4 367 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 SLC4A4Q9Y6R1 1079 aa18.55■□□□□ 0.56
TCHP-208ENST00000549550 TRANK1O15050 2925 aa18.54■□□□□ 0.56
TCHP-208ENST00000549550 ASGR1P07306 291 aa18.54■□□□□ 0.56
TCHP-208ENST00000549550 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
TCHP-208ENST00000549550 ACVR2BQ13705 512 aa18.54■□□□□ 0.56
TCHP-208ENST00000549550 RASIP1Q5U651 963 aa18.54■□□□□ 0.56
TCHP-208ENST00000549550 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
TCHP-208ENST00000549550 RPAP2Q8IXW5 612 aaPredicted RBP18.54■□□□□ 0.56
TCHP-208ENST00000549550 PCSK9Q8NBP7 692 aaKnown RBP18.54■□□□□ 0.56
TCHP-208ENST00000549550 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.54■□□□□ 0.56
TCHP-208ENST00000549550 PPP1R12CQ9BZL4 782 aa18.54■□□□□ 0.56
TCHP-208ENST00000549550 XIRP2A4UGR9 3374 aa18.53■□□□□ 0.56
TCHP-208ENST00000549550 ACRP10323 421 aa18.53■□□□□ 0.56
TCHP-208ENST00000549550 CCDC144BQ3MJ40 725 aa18.53■□□□□ 0.56
TCHP-208ENST00000549550 AKNAD1Q5T1N1 836 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms