RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 GPHNQ9NQX3 736 aaPredicted RBP8.42□□□□□ -1.06
FGD6-205ENST00000549499 CNPY2Q9Y2B0 182 aa8.42□□□□□ -1.06
FGD6-205ENST00000549499 NCOR2Q9Y618 2525 aa8.42□□□□□ -1.06
FGD6-205ENST00000549499 RPTORQ8N122 1335 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 CCER2I3L3R5 266 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 IGHDP01880 384 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 FCER1AP12319 257 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 MYCLP12524 364 aaPredicted RBP8.41□□□□□ -1.06
FGD6-205ENST00000549499 CSF2RAP15509 400 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 HOXA13P31271 388 aaPredicted RBP8.41□□□□□ -1.06
FGD6-205ENST00000549499 EPHB4P54760 987 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 ZNF589Q86UQ0 364 aaPredicted RBP8.41□□□□□ -1.06
FGD6-205ENST00000549499 ECHDC1Q9NTX5 307 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 PABPC4Q13310 644 aaKnown RBP eCLIP8.41□□□□□ -1.062e-6■■■■■ 41.4
FGD6-205ENST00000549499 SIAH1Q8IUQ4 282 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 TRPV6Q9H1D0 765 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 ARHGEF10LQ9HCE6 1279 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 RTEL1Q9NZ71 1219 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 FAM186AA6NE01 2351 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 RGS2P41220 211 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 LONRF3Q496Y0 759 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 DHX36Q9H2U1 1008 aaKnown RBP8.41□□□□□ -1.06
FGD6-205ENST00000549499 EPB41L4AQ9HCS5 686 aaPredicted RBP8.41□□□□□ -1.06
FGD6-205ENST00000549499 ZNF112Q9UJU3 913 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
FGD6-205ENST00000549499 TCF20Q9UGU0 1960 aaKnown RBP8.4□□□□□ -1.06
FGD6-205ENST00000549499 A0A0D9SFI3 127 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 RTP1P59025 263 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 COL9A3Q14050 684 aaPredicted RBP8.4□□□□□ -1.06
FGD6-205ENST00000549499 POLA2Q14181 598 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 SLFN13Q68D06 897 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 HERC5Q9UII4 1024 aaKnown RBP8.4□□□□□ -1.06
FGD6-205ENST00000549499 B4E1Z4 1266 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 KBTBD13C9JR72 458 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 CFBP00751 764 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 ADD2P35612 726 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 MAP2K5Q13163 448 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 ALG1Q9BT22 464 aa8.4□□□□□ -1.06
FGD6-205ENST00000549499 MYO5AQ9Y4I1 1855 aaKnown RBP8.4□□□□□ -1.07
FGD6-205ENST00000549499 GSG1L2A8MUP6 293 aa8.4□□□□□ -1.07
FGD6-205ENST00000549499 CTSHP09668 335 aa8.4□□□□□ -1.07
FGD6-205ENST00000549499 CCNA1P78396 465 aa8.4□□□□□ -1.07
FGD6-205ENST00000549499 FTOQ9C0B1 505 aaKnown RBP eCLIP8.4□□□□□ -1.07
FGD6-205ENST00000549499 STARD7Q9NQZ5 370 aa8.4□□□□□ -1.07
FGD6-205ENST00000549499 ADCY6O43306 1168 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 MUM1L1Q5H9M0 696 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 CATSPERGQ6ZRH7 1159 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 IFNL3Q8IZI9 196 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 RNPC3Q96LT9 517 aaKnown RBP8.39□□□□□ -1.07
FGD6-205ENST00000549499 BCAS3Q9H6U6 928 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 TAF6LQ9Y6J9 622 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 RFX7Q2KHR2 1363 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 CHD8Q9HCK8 2581 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 NFIBO00712 420 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 CLUL1Q15846 466 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 CCDC144BQ3MJ40 725 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 CXXC1Q9P0U4 656 aaPredicted RBP8.39□□□□□ -1.07
FGD6-205ENST00000549499 PAPPA2Q9BXP8 1791 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 MYL3P08590 195 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 RARBP10826 455 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 EIF2AK2P19525 551 aaKnown RBP8.39□□□□□ -1.07
FGD6-205ENST00000549499 NBR1Q14596 966 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 KCNA10Q16322 511 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
FGD6-205ENST00000549499 REM2Q8IYK8 340 aaPredicted RBP8.39□□□□□ -1.07
FGD6-205ENST00000549499 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 ZNF609O15014 1411 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 CPA1P15085 419 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 CA8P35219 290 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 FKBP1AP62942 108 aaKnown RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 OLFML2BQ68BL8 750 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 STRBPQ96SI9 672 aaKnown RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 TRMT13Q9NUP7 481 aaKnown RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 MX1P20591 662 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 NMIQ13287 307 aaPredicted RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 FKBP1CQ5VVH2 108 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 DHX37Q8IY37 1157 aaKnown RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 IL25Q9H293 177 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 CCPG1Q9ULG6 757 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 SLC34A2O95436 690 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 GCLCP48506 637 aaPredicted RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 PDE4BQ07343 736 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 BAATQ14032 418 aaPredicted RBP8.38□□□□□ -1.07
FGD6-205ENST00000549499 PGBD1Q96JS3 809 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 HOXC10Q9NYD6 342 aa8.38□□□□□ -1.07
FGD6-205ENST00000549499 RASA1P20936 1047 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 PTPREP23469 700 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 TMEM62Q0P6H9 643 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 C12orf60Q5U649 245 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 LHX8Q68G74 356 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 ERC1Q8IUD2 1116 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 ARHGAP45Q92619 1136 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 SH2D3AQ9BRG2 576 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 RNF146Q9NTX7 359 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 TRIM43BA6NCK2 446 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 GLRX3O76003 335 aaKnown RBP8.37□□□□□ -1.07
FGD6-205ENST00000549499 ASGR1P07306 291 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 MARK3P27448 753 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 IGBP1P78318 339 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms