RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 ATAD5Q96QE3 1844 aa13.15□□□□□ -0.3
TROAP-209ENST00000549275 SMCHD1A6NHR9 2005 aa13.15□□□□□ -0.3
TROAP-209ENST00000549275 LCHNA4D1U4 455 aa13.14□□□□□ -0.31
TROAP-209ENST00000549275 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
TROAP-209ENST00000549275 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
TROAP-209ENST00000549275 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
TROAP-209ENST00000549275 UPF3AQ9H1J1 476 aaKnown RBP13.14□□□□□ -0.31
TROAP-209ENST00000549275 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
TROAP-209ENST00000549275 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
TROAP-209ENST00000549275 PI4KBQ9UBF8 816 aa13.14□□□□□ -0.31
TROAP-209ENST00000549275 EP300Q09472 2414 aaPredicted RBP13.13□□□□□ -0.31
TROAP-209ENST00000549275 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 BTDP43251 543 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 GJA9P57773 515 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 NKX3-2P78367 333 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 GNASQ5JWF2 1037 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 METTL24Q5JXM2 366 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 RIPOR3Q96MK2 946 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 MTUS1Q9ULD2 1270 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 ZBTB21Q9ULJ3 1066 aa13.13□□□□□ -0.31
TROAP-209ENST00000549275 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
TROAP-209ENST00000549275 VCAM1P19320 739 aa13.12□□□□□ -0.31
TROAP-209ENST00000549275 LTBRP36941 435 aa13.12□□□□□ -0.31
TROAP-209ENST00000549275 KCNJ6P48051 423 aa13.12□□□□□ -0.31
TROAP-209ENST00000549275 RHBDL3P58872 404 aa13.12□□□□□ -0.31
TROAP-209ENST00000549275 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
TROAP-209ENST00000549275 RAD9AQ99638 391 aa13.12□□□□□ -0.31
TROAP-209ENST00000549275 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
TROAP-209ENST00000549275 NSUN3Q9H649 340 aaKnown RBP13.12□□□□□ -0.31
TROAP-209ENST00000549275 LINC01553A4QN01 128 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 B4GALT4O60513 344 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 LMNAP02545 664 aaKnown RBP13.11□□□□□ -0.31
TROAP-209ENST00000549275 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 JAG1P78504 1218 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 ITGA7Q13683 1181 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 PUM3Q15397 648 aaKnown RBP13.11□□□□□ -0.31
TROAP-209ENST00000549275 CTC1Q2NKJ3 1217 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 ZNF792Q3KQV3 632 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 TCEAL5Q5H9L2 206 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 NCAPG2Q86XI2 1143 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 FEZ1Q99689 392 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
TROAP-209ENST00000549275 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
TROAP-209ENST00000549275 GPR75-ASB3A0A0A6YYF3 556 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 SEMA3EO15041 775 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 ZBTB22O15209 634 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 FGFR2P21802 821 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 COG2Q14746 738 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 DZIP1Q86YF9 867 aaKnown RBP13.1□□□□□ -0.31
TROAP-209ENST00000549275 FOXP4Q8IVH2 680 aaPredicted RBP13.1□□□□□ -0.31
TROAP-209ENST00000549275 DNAAF4Q8WXU2 420 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 STK31Q9BXU1 1019 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 TRPV6Q9H1D0 765 aa13.1□□□□□ -0.31
TROAP-209ENST00000549275 GNL3LQ9NVN8 582 aaKnown RBP13.1□□□□□ -0.31
TROAP-209ENST00000549275 UNC79Q9P2D8 2635 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 CEP250Q9BV73 2442 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 SLC25A27O95847 323 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 ADRB1P08588 477 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 DMWDQ09019 674 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 RSPO4Q2I0M5 234 aaPredicted RBP13.09□□□□□ -0.31
TROAP-209ENST00000549275 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
TROAP-209ENST00000549275 KCNG4Q8TDN1 519 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 SAMD11Q96NU1 681 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 DENND2AQ9ULE3 1009 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 MROH7-TTC4A0A0A0MT08 1334 aa13.09□□□□□ -0.31
TROAP-209ENST00000549275 GJB5O95377 273 aa13.08□□□□□ -0.32
TROAP-209ENST00000549275 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
TROAP-209ENST00000549275 ICAM3P32942 547 aa13.08□□□□□ -0.32
TROAP-209ENST00000549275 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
TROAP-209ENST00000549275 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
TROAP-209ENST00000549275 MMP19Q99542 508 aa13.08□□□□□ -0.32
TROAP-209ENST00000549275 FTOQ9C0B1 505 aaKnown RBP eCLIP13.08□□□□□ -0.32
TROAP-209ENST00000549275 RPAP3Q9H6T3 665 aaPredicted RBP13.08□□□□□ -0.32
TROAP-209ENST00000549275 ZYXQ15942 572 aaKnown RBP13.07□□□□□ -0.32
TROAP-209ENST00000549275 LPIN2Q92539 896 aa13.07□□□□□ -0.32
TROAP-209ENST00000549275 CRBNQ96SW2 442 aa13.07□□□□□ -0.32
TROAP-209ENST00000549275 CD207Q9UJ71 328 aa13.07□□□□□ -0.32
TROAP-209ENST00000549275 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
TROAP-209ENST00000549275 FLNBO75369 2602 aaKnown RBP13.06□□□□□ -0.32
TROAP-209ENST00000549275 CTAGE5O15320 804 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 GDF11O95390 407 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 EYA4O95677 639 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 WDR5P61964 334 aaKnown RBP13.06□□□□□ -0.32
TROAP-209ENST00000549275 IRX5P78411 483 aaPredicted RBP13.06□□□□□ -0.32
TROAP-209ENST00000549275 PTPN21Q16825 1174 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 CXCL17Q6UXB2 119 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 HAUS7Q99871 368 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 PCDHGC5Q9Y5F6 944 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 GRIN2DO15399 1336 aa13.06□□□□□ -0.32
TROAP-209ENST00000549275 H3BNC9 293 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms