RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 FOXP2O15409 715 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 EPHB4P54760 987 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 COG2Q14746 738 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 ALX1Q15699 326 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 PRAMEF19Q5SWL8 479 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 SYMPKQ92797 1274 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 DIAPH3Q9NSV4 1193 aa18.69■□□□□ 0.58
CHMP1A-206ENST00000549139 ROBO3Q96MS0 1386 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 ERCC3P19447 782 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 TLE2Q04725 743 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 VPS53Q5VIR6 699 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 TMEM179Q6ZVK1 233 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 FERMT2Q96AC1 680 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 HOXC10Q9NYD6 342 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 PHF24Q9UPV7 400 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 CCDC171Q6TFL3 1326 aa18.68■□□□□ 0.58
CHMP1A-206ENST00000549139 GREB1LQ9C091 1923 aaPredicted RBP18.67■□□□□ 0.58
CHMP1A-206ENST00000549139 HSPD1P10809 573 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-206ENST00000549139 SEPT2Q15019 361 aa18.67■□□□□ 0.58
CHMP1A-206ENST00000549139 FAM47AQ5JRC9 791 aa18.67■□□□□ 0.58
CHMP1A-206ENST00000549139 ZNF589Q86UQ0 364 aaPredicted RBP18.67■□□□□ 0.58
CHMP1A-206ENST00000549139 ZNF287Q9HBT7 754 aa18.67■□□□□ 0.58
CHMP1A-206ENST00000549139 TACC3Q9Y6A5 838 aa18.67■□□□□ 0.58
CHMP1A-206ENST00000549139 MPHOSPH10O00566 681 aaKnown RBP18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 AKR1B1P15121 316 aa18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 PPARAQ07869 468 aa18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 USP38Q8NB14 1042 aa18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 MAML3Q96JK9 1138 aa18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 MKNK2Q9HBH9 465 aa18.66■□□□□ 0.58
CHMP1A-206ENST00000549139 KIAA0355O15063 1070 aa18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 FGAP02671 866 aa18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 SLC3A2P08195 630 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 GRIN2CQ14957 1233 aa18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 RNPC3Q96LT9 517 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 MROH8Q9H579 483 aa18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 PPP4R2Q9NY27 417 aa18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 ANAPC4Q9UJX5 808 aa18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 ZMYM6O95789 1325 aa18.65■□□□□ 0.58
CHMP1A-206ENST00000549139 MYH4Q9Y623 1939 aa18.64■□□□□ 0.58
CHMP1A-206ENST00000549139 CHD9Q3L8U1 2897 aa18.64■□□□□ 0.58
CHMP1A-206ENST00000549139 CLTBP09497 229 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 RASA1P20936 1047 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 DSG3P32926 999 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 PDE4BQ07343 736 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 TJAP1Q5JTD0 557 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 MB21D1Q8N884 522 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 SLC5A4Q9NY91 659 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 PARP14Q460N5 1801 aa18.64■□□□□ 0.57
CHMP1A-206ENST00000549139 CHMLP26374 656 aa18.63■□□□□ 0.57
CHMP1A-206ENST00000549139 RUFY2Q8WXA3 655 aa18.63■□□□□ 0.57
CHMP1A-206ENST00000549139 TANGO6Q9C0B7 1094 aa18.63■□□□□ 0.57
CHMP1A-206ENST00000549139 KANSL2Q9H9L4 492 aa18.63■□□□□ 0.57
CHMP1A-206ENST00000549139 NRBP1Q9UHY1 535 aa18.63■□□□□ 0.57
CHMP1A-206ENST00000549139 DNAJB2P25686 324 aa18.62■□□□□ 0.57
CHMP1A-206ENST00000549139 SIAH1Q8IUQ4 282 aa18.62■□□□□ 0.57
CHMP1A-206ENST00000549139 DSCC1Q9BVC3 393 aa18.62■□□□□ 0.57
CHMP1A-206ENST00000549139 XPNPEP3Q9NQH7 507 aa18.62■□□□□ 0.57
CHMP1A-206ENST00000549139 RAD50Q92878 1312 aa18.62■□□□□ 0.57
CHMP1A-206ENST00000549139 LAMA4Q16363 1823 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 TNFRSF10AO00220 468 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 PGK1P00558 417 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 FGRP09769 529 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 RAG1P15918 1043 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 COL9A1P20849 921 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 CTDSPL2Q05D32 466 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 SKAP1Q86WV1 359 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 NCAPG2Q86XI2 1143 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 ATG4CQ96DT6 458 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 ARHGEF10LQ9HCE6 1279 aa18.61■□□□□ 0.57
CHMP1A-206ENST00000549139 PLXNA1Q9UIW2 1896 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 A0A1W2PQ45 241 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 A0A1W2PQY0 241 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 PRDM1O75626 825 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 RARBP10826 455 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 FCER1AP12319 257 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 ICA1Q05084 483 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 FPGSQ05932 587 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 TMEM132BQ14DG7 1078 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 BMP2KLQ5H9B9 411 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 ANKRD33Q7Z3H0 272 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 RNF180Q86T96 592 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 TOX2Q96NM4 488 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 ZNF576Q9H609 170 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 ADAMTS5Q9UNA0 930 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 COL11A1P12107 1806 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-206ENST00000549139 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms